RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 SH2D3AQ9BRG2 576 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 RIOK1Q9BRS2 568 aaKnown RBP15.01□□□□□ -0.01
COL6A2-204ENST00000409416 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.01□□□□□ -0.01
COL6A2-204ENST00000409416 BCL9O00512 1426 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 DDX39AO00148 427 aaKnown RBP15.01□□□□□ -0.01
COL6A2-204ENST00000409416 MEIS1O00470 390 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 SASH3O75995 380 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 SEPT12Q8IYM1 358 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 SHISA4Q96DD7 197 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 JADE2Q9NQC1 790 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 USP40Q9NVE5 1235 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 CTAGE9A4FU28 777 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 KLK7P49862 253 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 DPYDQ12882 1025 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 DNAJC21Q5F1R6 531 aaKnown RBP15.01□□□□□ -0.01
COL6A2-204ENST00000409416 TYW1BQ6NUM6 668 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 CEP95Q96GE4 821 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 TMEM47Q9BQJ4 181 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 SUGCTQ9HAC7 445 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 EXOC1Q9NV70 894 aa15.01□□□□□ -0.01
COL6A2-204ENST00000409416 B4DLN1 442 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 SRGAP2O75044 1071 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 MAP3K9P80192 1104 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 TBX2Q13207 712 aaPredicted RBP15□□□□□ -0.01
COL6A2-204ENST00000409416 LLGL1Q15334 1064 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 TMTC3Q6ZXV5 915 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 GPR161Q8N6U8 529 aaKnown RBP15□□□□□ -0.01
COL6A2-204ENST00000409416 TRIML1Q8N9V2 468 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 ADGRG1Q9Y653 693 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 ERCC5P28715 1186 aaPredicted RBP15□□□□□ -0.01
COL6A2-204ENST00000409416 KRT31Q15323 416 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 PKN1Q16512 942 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 DNAAF5Q86Y56 855 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 CSGALNACT2Q8N6G5 542 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 CENPHQ9H3R5 247 aa15□□□□□ -0.01
COL6A2-204ENST00000409416 A0A1B0GTH6 734 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 FAM237AA0A1B0GTK4 181 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 FCER1AP12319 257 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 SARSP49591 514 aaKnown RBP14.99□□□□□ -0.01
COL6A2-204ENST00000409416 SECISBP2LQ93073 1101 aaKnown RBP14.99□□□□□ -0.01
COL6A2-204ENST00000409416 CCDC47Q96A33 483 aaKnown RBP14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L15C9J2P7 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L13C9JLJ4 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L11C9JVI0 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L18D6R9N7 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L22D6RA61 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L17D6RBQ6 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L19D6RCP7 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L20D6RJB6 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 MFAP3LO75121 409 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L24Q0WX57 530 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 TROAPQ12815 778 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 PAK1Q13153 545 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 USP17L6PQ6QN14 398 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 CTAGE1Q96RT6 745 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 ANKRD2Q9GZV1 360 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 VPS18Q9P253 973 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 COL18A1P39060 1754 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 CXCR5P32302 372 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 STIM1Q13586 685 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 LONRF2Q1L5Z9 754 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 ZNF579Q8NAF0 562 aaKnown RBP14.99□□□□□ -0.01
COL6A2-204ENST00000409416 TBCKQ8TEA7 893 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 RRP36Q96EU6 259 aaKnown RBP14.99□□□□□ -0.01
COL6A2-204ENST00000409416 HOMER2Q9NSB8 354 aa14.99□□□□□ -0.01
COL6A2-204ENST00000409416 KCNJ18B7U540 433 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 GPS2Q13227 327 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 KCNJ12Q14500 433 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 TAF3Q5VWG9 929 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 CNGA4Q8IV77 575 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 FERMT2Q96AC1 680 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 PHF20Q9BVI0 1012 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 ADD3Q9UEY8 706 aaKnown RBP14.98□□□□□ -0.01
COL6A2-204ENST00000409416 LAMB4A4D0S4 1761 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 TNS2Q63HR2 1409 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 TBC1D8O95759 1140 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 GYPCP04921 128 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 CDK8P49336 464 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 TBC1D8BQ0IIM8 1120 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 PRKG1Q13976 671 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 SEC23AQ15436 765 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 NCAPH2Q6IBW4 605 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.98□□□□□ -0.01
COL6A2-204ENST00000409416 PNPLA7Q6ZV29 1317 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 LDHCP07864 332 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 CACNA2D4Q7Z3S7 1137 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 CABP7Q86V35 215 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 KIFC2Q96AC6 838 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 CHP1Q99653 195 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 HDAC6Q9UBN7 1215 aa14.98□□□□□ -0.01
COL6A2-204ENST00000409416 TDP2O95551 362 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 HOXA13P31271 388 aaPredicted RBP14.97□□□□□ -0.01
COL6A2-204ENST00000409416 PRCPP42785 496 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 RDH13Q8NBN7 331 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 RGS22Q8NE09 1264 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 GSDMAQ96QA5 445 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 NARFQ9UHQ1 456 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 SPEF2Q9C093 1822 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 SFI1A8K8P3 1242 aa14.97□□□□□ -0.01
COL6A2-204ENST00000409416 PPP1R3GB7ZBB8 358 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms