RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 CCDC42Q96M95 316 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 NT5C3AQ9H0P0 336 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 SH3GLB2Q9NR46 395 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 RGPD1P0DJD0 1748 aa15.7■□□□□ 0.1
SCAF4-202ENST00000399804 CASP1P29466 404 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 KRT9P35527 623 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 SPATA1Q5VX52 437 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCAF4-202ENST00000399804 ZHX1Q9UKY1 873 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-202ENST00000399804 V9GYY5 206 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-202ENST00000399804 STRIP1Q5VSL9 837 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 GCOM1H8Y6P7 765 aaPredicted RBP15.69■□□□□ 0.1
SCAF4-202ENST00000399804 DYNC1I1O14576 645 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 POLR2MP0CAP2 368 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 SRGNP10124 158 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 EEF2P13639 858 aaKnown RBP15.69■□□□□ 0.1
SCAF4-202ENST00000399804 DDR1Q08345 913 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 MAEAQ7L5Y9 396 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 TPH2Q8IWU9 490 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 TAF4BQ92750 862 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 RUFY1Q96T51 708 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 TAOK3Q9H2K8 898 aa15.69■□□□□ 0.1
SCAF4-202ENST00000399804 BACH1O14867 736 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 EVCP57679 992 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 CDC42EP5Q6NZY7 148 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 NEK11Q8NG66 645 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 HOOK2Q96ED9 719 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 ACBD3Q9H3P7 528 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 PYCARDQ9ULZ3 195 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 MRPL11Q9Y3B7 192 aaKnown RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 BAZ2BQ9UIF8 2168 aaKnown RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 IKBKBO14920 756 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 FLOT1O75955 427 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 ATP1A3P13637 1013 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 SLC15A2Q16348 729 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 CDC37Q16543 378 aaPredicted RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 ARL6IP4Q66PJ3 421 aaKnown RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 PAGE5Q96GU1 130 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 OSBPL5Q9H0X9 879 aaPredicted RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 SLC39A2Q9NP94 309 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 BARHL2Q9NY43 387 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 hCG_1984214I3L0E3 225 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 GAS7O60861 476 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 FOSP01100 380 aaPredicted RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 CYP4A11Q02928 519 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 MORC3Q14149 939 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 LRRC8AQ8IWT6 810 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 ZNF713Q8N859 430 aaPredicted RBP15.68■□□□□ 0.1
SCAF4-202ENST00000399804 IL17RAQ96F46 866 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 BICD1Q96G01 975 aa15.68■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L10C9JJH3 530 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 ZNF500O60304 480 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-202ENST00000399804 UBXN2AP68543 259 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 DEFB132Q7Z7B7 95 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 ZNF579Q8NAF0 562 aaKnown RBP15.67■□□□□ 0.1
SCAF4-202ENST00000399804 AK8Q96MA6 479 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 MTMR4Q9NYA4 1195 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 RGPD2P0DJD1 1756 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 POLRMTO00411 1230 aaKnown RBP15.67■□□□□ 0.1
SCAF4-202ENST00000399804 CBX1P83916 185 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 DCAF15Q66K64 600 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 GPBP1Q86WP2 473 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 CACTINQ8WUQ7 758 aaKnown RBP15.67■□□□□ 0.1
SCAF4-202ENST00000399804 ARHGEF35A5YM69 484 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 ERCC5P28715 1186 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-202ENST00000399804 DCAF17Q5H9S7 520 aaPredicted RBP15.67■□□□□ 0.1
SCAF4-202ENST00000399804 SYDE2Q5VT97 1194 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 SCLT1Q96NL6 688 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 GUCA1BQ9UMX6 200 aa15.67■□□□□ 0.1
SCAF4-202ENST00000399804 SMIM22K7EJ46 135 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 CETN3O15182 167 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 ERLIN1O75477 346 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 NOP2P46087 812 aaKnown RBP15.66■□□□□ 0.1
SCAF4-202ENST00000399804 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.66■□□□□ 0.1
SCAF4-202ENST00000399804 KIAA1024Q9UPX6 916 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 F5H6K3 240 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 FOXN1O15353 648 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 KRT13P13646 458 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
SCAF4-202ENST00000399804 TNNT3P45378 269 aaPredicted RBP15.66■□□□□ 0.1
SCAF4-202ENST00000399804 STAT2P52630 851 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 KLRC3Q07444 240 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 MCTP2Q6DN12 878 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 C16orf86Q6ZW13 317 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 PHF20Q9BVI0 1012 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 JADE2Q9NQC1 790 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 CCPG1Q9ULG6 757 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 KCNJ18B7U540 433 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 ARHGAP6O43182 974 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 KCNJ12Q14500 433 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 DRC1Q96MC2 740 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 SAMSN1Q9NSI8 373 aaKnown RBP15.66■□□□□ 0.1
SCAF4-202ENST00000399804 ZBTB12Q9Y330 459 aaPredicted RBP15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L15C9J2P7 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L13C9JLJ4 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L11C9JVI0 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L18D6R9N7 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L22D6RA61 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L17D6RBQ6 530 aa15.66■□□□□ 0.1
SCAF4-202ENST00000399804 USP17L19D6RCP7 530 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms