RNA–Protein interactions for RNA: ENST00000399026.1

BRCC3-205, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 456 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-205ENST00000399026 SWT1Q5T5J6 900 aaKnown RBP9.84□□□□□ -0.83
BRCC3-205ENST00000399026 CREB3L3Q68CJ9 461 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 SLFN13Q68D06 897 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 CYB5R4Q7L1T6 521 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 TRIM47Q96LD4 638 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 KRT23Q9C075 422 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 CNNM2Q9H8M5 875 aa9.84□□□□□ -0.83
BRCC3-205ENST00000399026 FMNL1O95466 1100 aaPredicted RBP9.83□□□□□ -0.84
BRCC3-205ENST00000399026 PSMC4P43686 418 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 GCLCP48506 637 aaPredicted RBP9.83□□□□□ -0.84
BRCC3-205ENST00000399026 ERVK-9P63128 1117 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 ERVK-24P63145 666 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 CCDC96Q2M329 555 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 RCSD1Q6JBY9 416 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 KCTD1Q719H9 257 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 CHST3Q7LGC8 479 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 RALYLQ86SE5 291 aaKnown RBP9.83□□□□□ -0.84
BRCC3-205ENST00000399026 GMCL1P1Q8NEA9 526 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 ZSCAN10Q96SZ4 725 aaPredicted RBP9.83□□□□□ -0.84
BRCC3-205ENST00000399026 TMEM47Q9BQJ4 181 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 UBAC1Q9BSL1 405 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 PORCNQ9H237 461 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 EFCC1Q9HA90 598 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 BTBD7Q9P203 1132 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 RBPJLQ9UBG7 517 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 MORF4L1Q9UBU8 362 aa9.83□□□□□ -0.84
BRCC3-205ENST00000399026 FRMPD2Q68DX3 1309 aaPredicted RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 MYPNQ86TC9 1320 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 ZNF236Q9UL36 1845 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 TNPO2O14787 897 aaKnown RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 TOP1P11387 765 aaKnown RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 BMP3P12645 472 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 MCCP23508 829 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 NOVP48745 357 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 FCGRTP55899 365 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 ANTXR2P58335 489 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 PRKCZQ05513 592 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 TRDNQ13061 729 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 IKQ13123 557 aaPredicted RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 TJAP1Q5JTD0 557 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 IQCA1Q86XH1 822 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 MB21D2Q8IYB1 491 aaPredicted RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 ENAHQ8N8S7 591 aaPredicted RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 NCOA7Q8NI08 942 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 MKL1Q969V6 931 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 SLF1Q9BQI6 1058 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 TCP11L1Q9NUJ3 509 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 ZSWIM5Q9P217 1185 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 PPP1R9AQ9ULJ8 1098 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 PTCH2Q9Y6C5 1203 aa9.82□□□□□ -0.84
BRCC3-205ENST00000399026 RBBP6Q7Z6E9 1792 aaKnown RBP9.82□□□□□ -0.84
BRCC3-205ENST00000399026 TMEM232C9JQI7 657 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 RNF40O75150 1001 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 TAL1P17542 331 aaPredicted RBP9.81□□□□□ -0.84
BRCC3-205ENST00000399026 SLC1A4P43007 532 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 PLS1Q14651 629 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 COG2Q14746 738 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 NECTIN1Q15223 517 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 Q3C1V9 767 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 WDR78Q5VTH9 848 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 LBX2Q6XYB7 198 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 GPRC5AQ8NFJ5 357 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 GTF3C2Q8WUA4 911 aaPredicted RBP9.81□□□□□ -0.84
BRCC3-205ENST00000399026 KIFC2Q96AC6 838 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 SENP2Q9HC62 589 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 SYNPO2Q9UMS6 1093 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 GABRQQ9UN88 632 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 RABGAP1Q9Y3P9 1069 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 ADGRG1Q9Y653 693 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 DOCK3Q8IZD9 2030 aa9.81□□□□□ -0.84
BRCC3-205ENST00000399026 VWA5AO00534 786 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 GOLGA8HP0CJ92 632 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 PDHBP11177 359 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 SNAP25P60880 206 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 TMEM132BQ14DG7 1078 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 SEC23AQ15436 765 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 IFIT1BQ5T764 474 aaKnown RBP9.8□□□□□ -0.84
BRCC3-205ENST00000399026 RNF20Q5VTR2 975 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 FBXO46Q6PJ61 603 aaPredicted RBP9.8□□□□□ -0.84
BRCC3-205ENST00000399026 PNMA1Q8ND90 353 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 DCAF4Q8WV16 495 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 ABHD8Q96I13 439 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 GMCL1Q96IK5 515 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 TCEANC2Q96MN5 208 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 LRRC2Q9BYS8 371 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 SPATC1LQ9H0A9 340 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 KAT14Q9H8E8 782 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 CWC22Q9HCG8 908 aaKnown RBP9.8□□□□□ -0.84
BRCC3-205ENST00000399026 GPCPD1Q9NPB8 672 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 SRRDQ9UH36 339 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 PTPN22Q9Y2R2 807 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 GTF3C3Q9Y5Q9 886 aa9.8□□□□□ -0.84
BRCC3-205ENST00000399026 PLXNA1Q9UIW2 1896 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 IFIT3O14879 490 aaKnown RBP9.79□□□□□ -0.84
BRCC3-205ENST00000399026 PRC1O43663 620 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 REC8O95072 547 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 CPA1P15085 419 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 SLC16A2P36021 539 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 SLC4A3P48751 1232 aa9.79□□□□□ -0.84
BRCC3-205ENST00000399026 STAT2P52630 851 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms