RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 SLFN14P0C7P3 912 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 RPS8P62241 208 aaKnown RBP18.89■□□□□ 0.61
SIN3A-203ENST00000394949 TRIM68Q6AZZ1 485 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 CCDC13Q8IYE1 715 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 SUPT20HQ8NEM7 779 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 ZSCAN10Q96SZ4 725 aaPredicted RBP18.89■□□□□ 0.61
SIN3A-203ENST00000394949 NUF2Q9BZD4 464 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 DDAH1O94760 285 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 SLC1A4P43007 532 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 AFAP1L2Q8N4X5 818 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 KRT12Q99456 494 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 AATFQ9NY61 560 aaKnown RBP eCLIP18.89■□□□□ 0.61
SIN3A-203ENST00000394949 MAN1B1Q9UKM7 699 aa18.89■□□□□ 0.61
SIN3A-203ENST00000394949 TXNDC9O14530 226 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 PCP11498 1178 aaKnown RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 PHBP35232 272 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 BPIFA3Q9BQP9 254 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 MRPL44Q9H9J2 332 aaKnown RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 GCNT3O95395 438 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 OR52Z1P0C646 297 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 HOXA7P31268 230 aaPredicted RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 NCAPH2Q6IBW4 605 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 RNF168Q8IYW5 571 aaPredicted RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 ARPP21Q9UBL0 812 aaPredicted RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 ARHGEF5Q12774 1597 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 SCG2P13521 617 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 PPARDQ03181 441 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 RNASELQ05823 741 aaKnown RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 CNOT6LQ96LI5 555 aaKnown RBP18.88■□□□□ 0.61
SIN3A-203ENST00000394949 H0YIN7 160 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 LAD1O00515 517 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 SP4Q02446 784 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 NNTQ13423 1086 aa18.88■□□□□ 0.61
SIN3A-203ENST00000394949 PASKQ96RG2 1323 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 PTGDRQ13258 359 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 NECTIN1Q15223 517 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 UBE3CQ15386 1083 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 IL17REQ8NFR9 667 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 TBC1D7Q9P0N9 293 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 EHHADHQ08426 723 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 KMT5BQ4FZB7 885 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 TTC19Q6DKK2 380 aaPredicted RBP18.87■□□□□ 0.61
SIN3A-203ENST00000394949 SEPT14Q6ZU15 432 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 Q9H521 79 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 EPB41L5Q9HCM4 733 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 TMOD4Q9NZQ9 345 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 HMGB1P1B2RPK0 211 aaPredicted RBP18.87■□□□□ 0.61
SIN3A-203ENST00000394949 SEMA3EO15041 775 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 POLR2FP61218 127 aaKnown RBP18.87■□□□□ 0.61
SIN3A-203ENST00000394949 GOLGA8FQ08AF8 430 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 GOLGA8DPQ0D2H9 430 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 MYCT1Q8N699 235 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 RNF26Q9BY78 433 aaPredicted RBP18.87■□□□□ 0.61
SIN3A-203ENST00000394949 RWDD2AQ9UIY3 292 aa18.87■□□□□ 0.61
SIN3A-203ENST00000394949 SOWAHDA6NJG2 315 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 ARL1P40616 181 aaPredicted RBP18.86■□□□□ 0.61
SIN3A-203ENST00000394949 SF3A3Q12874 501 aaKnown RBP eCLIP18.86■□□□□ 0.61
SIN3A-203ENST00000394949 GPIHBP1Q8IV16 184 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 RIC8AQ9NPQ8 531 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 ZBED6P86452 979 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.86■□□□□ 0.61
SIN3A-203ENST00000394949 hCG_1642624A0A1W2PR95 340 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 LARGE1O95461 756 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 FMNL1O95466 1100 aaPredicted RBP18.86■□□□□ 0.61
SIN3A-203ENST00000394949 PDE6AP16499 860 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 APOA5Q6Q788 366 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 TRIM4Q9C037 500 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 TNKSO95271 1327 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 NDUFA10O95299 355 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 ERCC3P19447 782 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 SLMAPQ14BN4 828 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 ZNF658Q5TYW1 1059 aaPredicted RBP18.86■□□□□ 0.61
SIN3A-203ENST00000394949 LARGE2Q8N3Y3 721 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 ATP8A2Q9NTI2 1148 aa18.86■□□□□ 0.61
SIN3A-203ENST00000394949 SMCO2A6NFE2 343 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 N4BP1O75113 896 aaKnown RBP18.85■□□□□ 0.61
SIN3A-203ENST00000394949 NR1D1P20393 614 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 PEX19P40855 299 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 FAM98CQ17RN3 349 aaKnown RBP18.85■□□□□ 0.61
SIN3A-203ENST00000394949 DCUN1D2Q6PH85 259 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 PPP1R21Q6ZMI0 780 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 ATP2A3Q93084 1043 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 SPZ1Q9BXG8 430 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 THAP12O43422 761 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 MAN1A1P33908 653 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 IL9RQ01113 521 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 RASSF7Q02833 373 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 JPH2Q9BR39 696 aaPredicted RBP18.85■□□□□ 0.61
SIN3A-203ENST00000394949 ARHGAP31Q2M1Z3 1444 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 STK10O94804 968 aaKnown RBP18.85■□□□□ 0.61
SIN3A-203ENST00000394949 ZNF354CQ86Y25 554 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 ACRBPQ8NEB7 543 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 CCHCR1Q8TD31 782 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 IWS1Q96ST2 819 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 EIF6P56537 245 aaKnown RBP18.85■□□□□ 0.61
SIN3A-203ENST00000394949 TFAP4Q01664 338 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 GABPB2Q8TAK5 448 aaPredicted RBP18.85■□□□□ 0.61
SIN3A-203ENST00000394949 RILPQ96NA2 401 aa18.85■□□□□ 0.61
SIN3A-203ENST00000394949 PHKG2P15735 406 aa18.84■□□□□ 0.61
SIN3A-203ENST00000394949 ADCY8P40145 1251 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms