RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 ZBTB7AO95365 584 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 CYP2D6P10635 497 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ERCC3P19447 782 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 CHRNA5P30532 468 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 PLA2G4AP47712 749 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 GNGT1P63211 74 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 E2F5Q15329 346 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 LETM2Q2VYF4 491 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 RRAGBQ5VZM2 374 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ADALQ6DHV7 355 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 STYK1Q6J9G0 422 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ARHGAP27Q6ZUM4 889 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 C3orf67Q6ZVT6 689 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 KRT25Q7Z3Z0 450 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 MAATS1Q7Z4T9 603 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 IQUBQ8NA54 791 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 ERMNQ8TAM6 284 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 PI4KBQ9UBF8 816 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 LCMT1Q9UIC8 334 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 DISP2A7MBM2 1401 aa6.34□□□□□ -1.39
RFFL-202ENST00000394597 NEDD4P46934 1319 aa6.34□□□□□ -1.4
RFFL-202ENST00000394597 PHRF1Q9P1Y6 1649 aaKnown RBP6.34□□□□□ -1.4
RFFL-202ENST00000394597 TRPM3Q9HCF6 1732 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 GOLGA6L10A0A0M3HER8 536 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 VWA3AA6NCI4 1184 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 BTBD18B2RXH4 712 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 PPP1R12AO14974 1030 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 CHUKO15111 745 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 CRKP46108 304 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 CCDC144BQ3MJ40 725 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 FOXP4Q8IVH2 680 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 RPUSD2Q8IZ73 545 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 SLC16A10Q8TF71 515 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 EPC1Q9H2F5 836 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 BAIAP2L1Q9UHR4 511 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 RGPD2P0DJD1 1756 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 SMCO2A6NFE2 343 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 NR1I2O75469 434 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 ECM2O94769 699 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 CDC25BP30305 580 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 ADCY7P51828 1080 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 NONOQ15233 471 aaKnown RBP eCLIP6.33□□□□□ -1.4
RFFL-202ENST00000394597 ZRSR2Q15696 482 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 ABCB5Q2M3G0 1257 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 GALNT17Q6IS24 598 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 GOPCQ9HD26 462 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 JADE2Q9NQC1 790 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 PICK1Q9NRD5 415 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 KCNH3Q9ULD8 1083 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 SLIT2O94813 1529 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 GOLGA6BA6NDN3 693 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 TTLL1O95922 423 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 GOLGA8HP0CJ92 632 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 PAFAH1B1P43034 410 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 NOP2P46087 812 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 FANCCQ00597 558 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 AOC3Q16853 763 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 KRT79Q5XKE5 535 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 BLIDQ8IZY5 108 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 LRRC47Q8N1G4 583 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 LY9Q9HBG7 655 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 LRRC4BQ9NT99 713 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 RTEL1Q9NZ71 1219 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 CLEC11AQ9Y240 323 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 SAMM50Q9Y512 469 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 FAM169AQ9Y6X4 670 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 PRPF3O43395 683 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 RNF40O75150 1001 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 ZNF202O95125 648 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 FGFR1OPO95684 399 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 IDEP14735 1019 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 CKAP4Q07065 602 aaKnown RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 CIAPIN1Q6FI81 312 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 PACS2Q86VP3 889 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 VGLL2Q8N8G2 317 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 FERMT2Q96AC1 680 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 CAPZA3Q96KX2 299 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 NUP88Q99567 741 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 TSG101Q99816 390 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 CAPS2Q9BXY5 557 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 FOXP1Q9H334 677 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 SUDS3Q9H7L9 328 aaPredicted RBP6.33□□□□□ -1.4
RFFL-202ENST00000394597 KANSL2Q9H9L4 492 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 FHOD1Q9Y613 1164 aa6.33□□□□□ -1.4
RFFL-202ENST00000394597 PHLPP2Q6ZVD8 1323 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 MYO3BQ8WXR4 1341 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 CLRN2A0PK11 232 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 A6NNZ2 444 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 POLRMTO00411 1230 aaKnown RBP6.32□□□□□ -1.4
RFFL-202ENST00000394597 ORC4O43929 436 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 PRR29P0C7W0 189 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 ELF1P32519 619 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 RCAN1P53805 252 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 ICA1Q05084 483 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 SNCBQ16143 134 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 TUBB8Q3ZCM7 444 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 SBK1Q52WX2 424 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 SPECC1Q5M775 1068 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 SLFN13Q68D06 897 aa6.32□□□□□ -1.4
RFFL-202ENST00000394597 SGMS1Q86VZ5 419 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms