RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 A0A0U1RQG5 324 aaPredicted RBP18.37■□□□□ 0.53
CHMP3-202ENST00000393773 MINDY4BA8MYZ0 360 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 ZBED4O75132 1171 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 OAZ1P54368 228 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 TMEM240Q5SV17 173 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 MIER1Q8N108 512 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 LRRC47Q8N1G4 583 aaKnown RBP18.37■□□□□ 0.53
CHMP3-202ENST00000393773 PCSK9Q8NBP7 692 aaKnown RBP18.37■□□□□ 0.53
CHMP3-202ENST00000393773 GMCL1P1Q8NEA9 526 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 KIFC2Q96AC6 838 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 CEP95Q96GE4 821 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 ZNF576Q9H609 170 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 PRDM6Q9NQX0 595 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 ECHDC1Q9NTX5 307 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 CLIP2Q9UDT6 1046 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 BDP1A6H8Y1 2624 aa18.37■□□□□ 0.53
CHMP3-202ENST00000393773 ASTN1O14525 1302 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 GPAA1O43292 621 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 PRDM1O75626 825 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 NKX3-2P78367 333 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 PPIGQ13427 754 aaKnown RBP eCLIP18.36■□□□□ 0.537e-11■■□□□ 12.6
CHMP3-202ENST00000393773 CCDC144CPQ8IYA2 1237 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 ANKRD35Q8N283 1001 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 CHST13Q8NET6 341 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 MKL1Q969V6 931 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 PBX4Q9BYU1 374 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 MTMR4Q9NYA4 1195 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 FBXO40Q9UH90 709 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 FEM1BQ9UK73 627 aa18.36■□□□□ 0.53
CHMP3-202ENST00000393773 NCOR1O75376 2440 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 M0R2C6 588 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 ARVCFO00192 962 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 CSF2RAP15509 400 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 PBX2P40425 430 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 SLC4A3P48751 1232 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 TSHZ3Q63HK5 1081 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 SYMPKQ92797 1274 aaKnown RBP18.35■□□□□ 0.53
CHMP3-202ENST00000393773 XIRP2A4UGR9 3374 aa18.35■□□□□ 0.53
CHMP3-202ENST00000393773 SCN5AQ14524 2016 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 GRXCR1A8MXD5 290 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 TTLL1O95922 423 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 CD4P01730 458 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 TDO2P48775 406 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 CNTN2Q02246 1040 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 TJAP1Q5JTD0 557 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 PSRC1Q6PGN9 363 aaPredicted RBP18.34■□□□□ 0.53
CHMP3-202ENST00000393773 FAM133AQ8N9E0 248 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 PPP1R12CQ9BZL4 782 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 CHMP4BQ9H444 224 aaKnown RBP18.34■□□□□ 0.53
CHMP3-202ENST00000393773 SPC25Q9HBM1 224 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 HOMER2Q9NSB8 354 aa18.34■□□□□ 0.53
CHMP3-202ENST00000393773 ZNF536O15090 1300 aa18.33■□□□□ 0.53
CHMP3-202ENST00000393773 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.33■□□□□ 0.52
CHMP3-202ENST00000393773 RNF113AO15541 343 aaKnown RBP18.33■□□□□ 0.52
CHMP3-202ENST00000393773 GNAT2P19087 354 aa18.33■□□□□ 0.52
CHMP3-202ENST00000393773 GNASQ5JWF2 1037 aa18.33■□□□□ 0.52
CHMP3-202ENST00000393773 CCDC174Q6PII3 467 aa18.33■□□□□ 0.52
CHMP3-202ENST00000393773 TMEM199Q8N511 208 aa18.33■□□□□ 0.52
CHMP3-202ENST00000393773 ACAD9Q9H845 621 aa18.33■□□□□ 0.52
CHMP3-202ENST00000393773 A1CFQ9NQ94 594 aaKnown RBP18.33■□□□□ 0.52
CHMP3-202ENST00000393773 CTDP1Q9Y5B0 961 aaPredicted RBP18.33■□□□□ 0.52
CHMP3-202ENST00000393773 ZFYP08048 801 aaPredicted RBP18.32■□□□□ 0.52
CHMP3-202ENST00000393773 ACRP10323 421 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 BMP3P12645 472 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 BEX3Q00994 111 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 ZNF365Q70YC5 407 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 SLC43A3Q8NBI5 491 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 NEDD1Q8NHV4 660 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 ZNF287Q9HBT7 754 aa18.32■□□□□ 0.52
CHMP3-202ENST00000393773 GNEQ9Y223 722 aaKnown RBP18.32■□□□□ 0.52
CHMP3-202ENST00000393773 UMODL1Q5DID0 1318 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 TLR3O15455 904 aaKnown RBP18.31■□□□□ 0.52
CHMP3-202ENST00000393773 CYP2C18P33260 490 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 STAT2P52630 851 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 SLFN13Q68D06 897 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 ZNF444Q8N0Y2 327 aaPredicted RBP18.31■□□□□ 0.52
CHMP3-202ENST00000393773 PRDM12Q9H4Q4 367 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 RNF146Q9NTX7 359 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 CXXC1Q9P0U4 656 aaPredicted RBP18.31■□□□□ 0.52
CHMP3-202ENST00000393773 SCN10AQ9Y5Y9 1956 aa18.31■□□□□ 0.52
CHMP3-202ENST00000393773 PTPRSQ13332 1948 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 SOWAHBA6NEL2 793 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 TMEM232C9JQI7 657 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 FDX1P10109 184 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 PTGS1P23219 599 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 AKNAD1Q5T1N1 836 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 CCDC129Q6ZRS4 1044 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 TLK2Q86UE8 772 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 IFNL3Q8IZI9 196 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 HERVK_113Q902F9 699 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 VTI1AQ96AJ9 217 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 GPATCH3Q96I76 525 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 GMCL1Q96IK5 515 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 AGBL1Q96MI9 1066 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 GAS2L1Q99501 681 aaPredicted RBP18.3■□□□□ 0.52
CHMP3-202ENST00000393773 IL23AQ9NPF7 189 aa18.3■□□□□ 0.52
CHMP3-202ENST00000393773 DDX49Q9Y6V7 483 aaKnown RBP18.3■□□□□ 0.52
CHMP3-202ENST00000393773 GRIN2DO15399 1336 aa18.29■□□□□ 0.52
CHMP3-202ENST00000393773 TSPY3P0CV98 308 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms