RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 PLAAQ9Y263 795 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 BACH1O14867 736 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 ADCY7P51828 1080 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 GRAMD4Q6IC98 578 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 CC2D1AQ6P1N0 951 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 PIK3R5Q8WYR1 880 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 ABCC1P33527 1531 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 UGGT2Q9NYU1 1516 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 CYP2J2P51589 502 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 PLTPP55058 493 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 SH3GL3Q99963 347 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 SPZ1Q9BXG8 430 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 BIN2Q9UBW5 565 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 SLC12A2P55011 1212 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 DHX9Q08211 1270 aaKnown RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 SMYD4Q8IYR2 804 aaPredicted RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 SDCCAG3Q96C92 435 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 CNOT6LQ96LI5 555 aaKnown RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 ELAC2Q9BQ52 826 aaKnown RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 ADCY9O60503 1353 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 ZMYM6O95789 1325 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 FTCDO95954 541 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 KRT25Q7Z3Z0 450 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 THOC1Q96FV9 657 aaKnown RBP17.66■□□□□ 0.42
SHANK1-204ENST00000391814 PANK4Q9NVE7 773 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 TTLL3Q9Y4R7 772 aa17.66■□□□□ 0.42
SHANK1-204ENST00000391814 TECP42680 631 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 RNASELQ05823 741 aaKnown RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 OGFOD1Q8N543 542 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 PEG3Q9GZU2 1588 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 ZBBXA8MT70 800 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 XRCC5P13010 732 aaKnown RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 SAT1P21673 171 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 THOC2Q8NI27 1593 aaKnown RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 KRT81Q14533 505 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 NAA30Q147X3 362 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 TEKT1Q969V4 418 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 SUCLG2Q96I99 432 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 SLC39A2Q9NP94 309 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 MAN1B1Q9UKM7 699 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 A0A0D9SFI3 127 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 CASP2P42575 452 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 C16orf87Q6PH81 154 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 ARHGEF18Q6ZSZ5 1173 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 MYOCDQ8IZQ8 938 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 ZNF274Q96GC6 653 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 HAUS8Q9BT25 410 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 COL17A1Q9UMD9 1497 aaPredicted RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 USP19O94966 1318 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 H0Y3Z8 333 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 DYNC1I2Q13409 638 aaKnown RBP17.65■□□□□ 0.42
SHANK1-204ENST00000391814 GNPTABQ3T906 1256 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 PPME1Q9Y570 386 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 KIF21AQ7Z4S6 1674 aa17.65■□□□□ 0.42
SHANK1-204ENST00000391814 WDR91A4D1P6 747 aa17.64■□□□□ 0.42
SHANK1-204ENST00000391814 MRPL12P52815 198 aaKnown RBP17.64■□□□□ 0.42
SHANK1-204ENST00000391814 BEND6Q5SZJ8 279 aaPredicted RBP17.64■□□□□ 0.42
SHANK1-204ENST00000391814 HMGB1P1B2RPK0 211 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-204ENST00000391814 TTC4O95801 387 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 DSCC1Q9BVC3 393 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 CCDC92Q53HC0 331 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-204ENST00000391814 PPWD1Q96BP3 646 aaKnown RBP17.64■□□□□ 0.41
SHANK1-204ENST00000391814 SEPT10Q9P0V9 454 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 NUB1Q9Y5A7 615 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 LDHBP07195 334 aaKnown RBP17.64■□□□□ 0.41
SHANK1-204ENST00000391814 ST5P78524 1137 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 MRC2Q9UBG0 1479 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 TOPBP1Q92547 1522 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 GTPBP6O43824 516 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-204ENST00000391814 VSTM4Q8IW00 320 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 KBTBD3Q8NAB2 608 aa17.64■□□□□ 0.41
SHANK1-204ENST00000391814 NHEJ1Q9H9Q4 299 aaPredicted RBP17.64■□□□□ 0.41
SHANK1-204ENST00000391814 GPBP1Q86WP2 473 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 EDC3Q96F86 508 aaKnown RBP17.63■□□□□ 0.41
SHANK1-204ENST00000391814 NFU1Q9UMS0 254 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 LRRC59Q96AG4 307 aaKnown RBP17.63■□□□□ 0.41
SHANK1-204ENST00000391814 RUNDC3BQ96NL0 473 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 EPS15L1Q9UBC2 864 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 CUL4BQ13620 913 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 NIP7Q9Y221 180 aaKnown RBP eCLIP17.63■□□□□ 0.41
SHANK1-204ENST00000391814 FAM135BQ49AJ0 1406 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 STAM2O75886 525 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 FBXO31Q5XUX0 539 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-204ENST00000391814 BBOF1Q8ND07 529 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 GRAMD1CQ8IYS0 662 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 GABPB2Q8TAK5 448 aaPredicted RBP17.63■□□□□ 0.41
SHANK1-204ENST00000391814 AP1M1Q9BXS5 423 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 ECT2Q9H8V3 914 aa17.63■□□□□ 0.41
SHANK1-204ENST00000391814 NME8Q8N427 588 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 NFATC2IPQ8NCF5 419 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 MAGOHBQ96A72 148 aaKnown RBP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 DRC3Q9H069 523 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 TTBK2Q6IQ55 1244 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 EEF2KMTQ96G04 330 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 FTOQ9C0B1 505 aaKnown RBP eCLIP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 IKBKBO14920 756 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 EEF1B2P24534 225 aaKnown RBP17.62■□□□□ 0.41
SHANK1-204ENST00000391814 RWDD2BP57060 319 aa17.62■□□□□ 0.41
SHANK1-204ENST00000391814 ARHGAP4P98171 946 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms