RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 RCOR1Q9UKL0 485 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 HMGCS2P54868 508 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 FMR1Q06787 632 aaKnown RBP eCLIP26.62■■□□□ 1.853e-7■□□□□ 8.4
PPM1B-203ENST00000378540 STK38Q15208 465 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 PIK3AP1Q6ZUJ8 805 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 ARMC9Q7Z3E5 817 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 TANGO6Q9C0B7 1094 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 AFG3L2Q9Y4W6 797 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 PCDHA1Q9Y5I3 950 aa26.62■■□□□ 1.85
PPM1B-203ENST00000378540 PLA2G6O60733 806 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 VCAM1P19320 739 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 TOB1P50616 345 aaPredicted RBP26.61■■□□□ 1.85
PPM1B-203ENST00000378540 FBXO11Q86XK2 927 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 ANKRD13AQ8IZ07 590 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 GPT2Q8TD30 523 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 CLMNQ96JQ2 1002 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 POLR3EQ9NVU0 708 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 PCDHA6Q9UN73 950 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 PCDHA8Q9Y5H6 950 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 ELP1O95163 1332 aa26.61■■□□□ 1.85
PPM1B-203ENST00000378540 PHIPQ8WWQ0 1821 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 C19orf81C9J6K1 198 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 ADCY7P51828 1080 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 SF3A1Q15459 793 aaKnown RBP26.6■■□□□ 1.85
PPM1B-203ENST00000378540 RILPL1Q5EBL4 403 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 PPP1R18Q6NYC8 613 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 LDHDQ86WU2 507 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 CNKSR2Q8WXI2 1034 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 AMNQ9BXJ7 453 aa26.6■■□□□ 1.85
PPM1B-203ENST00000378540 RPAP3Q9H6T3 665 aaPredicted RBP26.6■■□□□ 1.85
PPM1B-203ENST00000378540 UBE2HP62256 183 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 USH1GQ495M9 461 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 CCDC174Q6PII3 467 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 NOL7Q9UMY1 257 aaKnown RBP26.59■■□□□ 1.85
PPM1B-203ENST00000378540 OTOFQ9HC10 1997 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 CCDC194A0A1B0GVG4 234 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 ESYT2A0FGR8 921 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 GOLGA6L4A6NEF3 574 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 NASPP49321 788 aaPredicted RBP26.59■■□□□ 1.85
PPM1B-203ENST00000378540 LINC00301Q8NCQ3 95 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 BICD2Q8TD16 824 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 TMOD4Q9NZQ9 345 aa26.59■■□□□ 1.85
PPM1B-203ENST00000378540 M0R2N6 131 aa26.58■■□□□ 1.85
PPM1B-203ENST00000378540 MAP3K11Q16584 847 aa26.58■■□□□ 1.85
PPM1B-203ENST00000378540 SLF1Q9BQI6 1058 aa26.58■■□□□ 1.85
PPM1B-203ENST00000378540 BIN2Q9UBW5 565 aaPredicted RBP26.58■■□□□ 1.85
PPM1B-203ENST00000378540 FLOT1O75955 427 aa26.57■■□□□ 1.84
PPM1B-203ENST00000378540 YEATS4O95619 227 aa26.57■■□□□ 1.84
PPM1B-203ENST00000378540 RANBP17Q9H2T7 1088 aaKnown RBP26.57■■□□□ 1.84
PPM1B-203ENST00000378540 PCDHB6Q9Y5E3 794 aa26.57■■□□□ 1.84
PPM1B-203ENST00000378540 PAPPA2Q9BXP8 1791 aa26.57■■□□□ 1.84
PPM1B-203ENST00000378540 SPTLC2O15270 562 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 TAL1P17542 331 aaPredicted RBP26.56■■□□□ 1.84
PPM1B-203ENST00000378540 ME1P48163 572 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 KLHL40Q2TBA0 621 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 JAKMIP3Q5VZ66 844 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 REXO1Q8N1G1 1221 aaKnown RBP26.56■■□□□ 1.84
PPM1B-203ENST00000378540 PRPF38AQ8NAV1 312 aaKnown RBP26.56■■□□□ 1.84
PPM1B-203ENST00000378540 OTUD5Q96G74 571 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 PGBD1Q96JS3 809 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 PSTPIP2Q9H939 334 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 RIC8AQ9NPQ8 531 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 MBD3O95983 291 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 CUL5Q93034 780 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 C12orf42Q96LP6 360 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 TMEM260Q9NX78 707 aa26.56■■□□□ 1.84
PPM1B-203ENST00000378540 MRPL12P52815 198 aaKnown RBP26.55■■□□□ 1.84
PPM1B-203ENST00000378540 SLC39A14Q15043 492 aa26.55■■□□□ 1.84
PPM1B-203ENST00000378540 ERO1BQ86YB8 467 aa26.55■■□□□ 1.84
PPM1B-203ENST00000378540 RBM46Q8TBY0 533 aaKnown RBP26.55■■□□□ 1.84
PPM1B-203ENST00000378540 KCNG4Q8TDN1 519 aa26.55■■□□□ 1.84
PPM1B-203ENST00000378540 PPATQ06203 517 aa26.54■■□□□ 1.84
PPM1B-203ENST00000378540 UBE2SQ16763 222 aa26.54■■□□□ 1.84
PPM1B-203ENST00000378540 KRT25Q7Z3Z0 450 aa26.54■■□□□ 1.84
PPM1B-203ENST00000378540 GZF1Q9H116 711 aaPredicted RBP26.54■■□□□ 1.84
PPM1B-203ENST00000378540 MARCKSP29966 332 aaPredicted RBP26.53■■□□□ 1.84
PPM1B-203ENST00000378540 PTPAQ15257 358 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 ZNF174Q15697 407 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 TTC38Q5R3I4 469 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 PCDHA7Q9UN72 937 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 INF2Q27J81 1249 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 SH3D19Q5HYK7 790 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 PPP1R9AQ9ULJ8 1098 aa26.53■■□□□ 1.84
PPM1B-203ENST00000378540 CTDP1Q9Y5B0 961 aaPredicted RBP26.53■■□□□ 1.84
PPM1B-203ENST00000378540 SPDYE5A6NIY4 337 aa26.52■■□□□ 1.84
PPM1B-203ENST00000378540 WNT7AO00755 349 aa26.52■■□□□ 1.84
PPM1B-203ENST00000378540 IRF6O14896 467 aa26.52■■□□□ 1.84
PPM1B-203ENST00000378540 TRAF1Q13077 416 aa26.52■■□□□ 1.84
PPM1B-203ENST00000378540 NONOQ15233 471 aaKnown RBP eCLIP26.52■■□□□ 1.84
PPM1B-203ENST00000378540 LDLRAD1Q5T700 205 aa26.52■■□□□ 1.84
PPM1B-203ENST00000378540 CEP131Q9UPN4 1083 aa26.52■■□□□ 1.84
PPM1B-203ENST00000378540 TRAPPC10P48553 1259 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 CAVIN1Q6NZI2 390 aaKnown RBP26.51■■□□□ 1.83
PPM1B-203ENST00000378540 OPTNQ96CV9 577 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 SLC10A4Q96EP9 437 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 GLT8D2Q9H1C3 349 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 USP17L15C9J2P7 530 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 USP17L13C9JLJ4 530 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 USP17L11C9JVI0 530 aa26.51■■□□□ 1.83
PPM1B-203ENST00000378540 USP17L18D6R9N7 530 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms