RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 STAG2Q8N3U4 1231 aa23.31■■□□□ 1.32
RER1-204ENST00000378518 FBXO40Q9UH90 709 aa23.31■■□□□ 1.32
RER1-204ENST00000378518 GABRQQ9UN88 632 aa23.31■■□□□ 1.32
RER1-204ENST00000378518 PTCH2Q9Y6C5 1203 aa23.31■■□□□ 1.32
RER1-204ENST00000378518 SLC15A5A6NIM6 579 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 ICAM1P05362 532 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 PTPREP23469 700 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 GNAQP50148 359 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 SNAP25P60880 206 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 IRF5Q13568 498 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 TKFCQ3LXA3 575 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 APOA5Q6Q788 366 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 MICU3Q86XE3 530 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 ADGRF4Q8IZF3 695 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 FBXL16Q8N461 479 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 CPVLQ9H3G5 476 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 CCPG1Q9ULG6 757 aa23.3■■□□□ 1.32
RER1-204ENST00000378518 KLF18A0A0U1RQI7 1052 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 ZBTB43O43298 467 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 FCER1AP12319 257 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 RGS2P41220 211 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 ABRAQ8N0Z2 381 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 CHST13Q8NET6 341 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 BRF1Q92994 677 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 AGBL1Q96MI9 1066 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 LZTS2Q9BRK4 669 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 UPF3BQ9BZI7 483 aaKnown RBP23.29■■□□□ 1.32
RER1-204ENST00000378518 PLXNA1Q9UIW2 1896 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 NAP1L2Q9ULW6 460 aaPredicted RBP23.29■■□□□ 1.32
RER1-204ENST00000378518 ZNF536O15090 1300 aa23.29■■□□□ 1.32
RER1-204ENST00000378518 ALAS1P13196 640 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 GRB14Q14449 540 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 KCTD2Q14681 263 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 CDC37Q16543 378 aaPredicted RBP23.28■■□□□ 1.32
RER1-204ENST00000378518 MORN1Q5T089 497 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 MMP19Q99542 508 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 SLC5A4Q9NY91 659 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 GJD2Q9UKL4 321 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 RIPK3Q9Y572 518 aa23.28■■□□□ 1.32
RER1-204ENST00000378518 RBBP6Q7Z6E9 1792 aaKnown RBP23.27■■□□□ 1.32
RER1-204ENST00000378518 RXRAP19793 462 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 RCAN1P53805 252 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 MAP2K5Q13163 448 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 SLC9C1Q4G0N8 1177 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 RAB11FIP4Q86YS3 637 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 CCDC144CPQ8IYA2 1237 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 FANCBQ8NB91 859 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 SLAIN1Q8ND83 568 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 IL17RAQ96F46 866 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 AGXT2Q9BYV1 514 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 ACAD9Q9H845 621 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 HOMER2Q9NSB8 354 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 RNF146Q9NTX7 359 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 PDRG1Q9NUG6 133 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 RBM28Q9NW13 759 aaKnown RBP23.27■■□□□ 1.32
RER1-204ENST00000378518 BRPF3Q9ULD4 1205 aa23.27■■□□□ 1.32
RER1-204ENST00000378518 GOLGA8AA7E2F4 631 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 ADCY3O60266 1144 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 CYP2B6P20813 491 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 ADORA2AP29274 412 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 APOBRQ0VD83 1088 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 NBPF11Q86T75 865 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 DPP9Q86TI2 863 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 TRERF1Q96PN7 1200 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 APBA2Q99767 749 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 C22orf23Q9BZE7 217 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 JMJD4Q9H9V9 463 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 HPS5Q9UPZ3 1129 aa23.26■■□□□ 1.31
RER1-204ENST00000378518 SMCHD1A6NHR9 2005 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 SMARCA1P28370 1054 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 GRK4P32298 578 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 RTN1Q16799 776 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 TRMT44Q8IYL2 757 aaKnown RBP23.25■■□□□ 1.31
RER1-204ENST00000378518 PXYLP1Q8TE99 480 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 USP6NLQ92738 828 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 RIOX1Q9H6W3 641 aa23.25■■□□□ 1.31
RER1-204ENST00000378518 XRCC5P13010 732 aaKnown RBP23.24■■□□□ 1.31
RER1-204ENST00000378518 METAP2P50579 478 aaKnown RBP eCLIP23.24■■□□□ 1.31
RER1-204ENST00000378518 TRAF1Q13077 416 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 PPP2R5BQ15173 497 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 QRICH1Q2TAL8 776 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.24■■□□□ 1.31
RER1-204ENST00000378518 HOMER1Q86YM7 354 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 ANKRD35Q8N283 1001 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 DDX11Q96FC9 970 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 SPZ1Q9BXG8 430 aa23.24■■□□□ 1.31
RER1-204ENST00000378518 BAZ2BQ9UIF8 2168 aaKnown RBP23.24■■□□□ 1.31
RER1-204ENST00000378518 ZBTB5O15062 677 aa23.23■■□□□ 1.31
RER1-204ENST00000378518 TOB2Q14106 344 aaPredicted RBP23.23■■□□□ 1.31
RER1-204ENST00000378518 USH1GQ495M9 461 aa23.23■■□□□ 1.31
RER1-204ENST00000378518 FBXO11Q86XK2 927 aa23.23■■□□□ 1.31
RER1-204ENST00000378518 MTMR8Q96EF0 704 aa23.23■■□□□ 1.31
RER1-204ENST00000378518 AMNQ9BXJ7 453 aa23.23■■□□□ 1.31
RER1-204ENST00000378518 BIN2Q9UBW5 565 aaPredicted RBP23.23■■□□□ 1.31
RER1-204ENST00000378518 SEC63Q9UGP8 760 aaKnown RBP23.23■■□□□ 1.31
RER1-204ENST00000378518 ABCB11O95342 1321 aa23.23■■□□□ 1.31
RER1-204ENST00000378518 CCDC196A0A1B0GTZ2 297 aa23.22■■□□□ 1.31
RER1-204ENST00000378518 PLEKHA8P1O95397 391 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms