RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 CYP2J2P51589 502 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 NCAPG2Q86XI2 1143 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 RTKN2Q8IZC4 609 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 TTC16Q8NEE8 873 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 CEP95Q96GE4 821 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 USP17L5A8MUK1 530 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 HOXA13P31271 388 aaPredicted RBP19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 LONP1P36776 959 aaKnown RBP19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 MYOCDQ8IZQ8 938 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 NRBP1Q9UHY1 535 aa19.98■□□□□ 0.79
PTPDC1-202ENST00000375360 GTPBP6O43824 516 aaPredicted RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 BARGINQ6ZT62 677 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 UBN2Q6ZU65 1347 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 TAOK3Q9H2K8 898 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 ARFGAP3Q9NP61 516 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 CALUO43852 315 aaPredicted RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 TMTC3Q6ZXV5 915 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 MAATS1Q7Z4T9 603 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 NSUN4Q96CB9 384 aaKnown RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 ZNF609O15014 1411 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 SEPT2Q15019 361 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 INTS5Q6P9B9 1019 aaKnown RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 FOXP4Q8IVH2 680 aaPredicted RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 OXER1Q8TDS5 423 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 CKAP4Q07065 602 aaKnown RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 MORC3Q14149 939 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 RC3H1Q5TC82 1133 aaKnown RBP19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 RRAGAQ7L523 313 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 DYDC1Q8WWB3 177 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 DESI2Q9BSY9 194 aa19.97■□□□□ 0.79
PTPDC1-202ENST00000375360 MST1RQ04912 1400 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 SPATA31A6Q5VVP1 1343 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 KCNJ18B7U540 433 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 KCNJ12Q14500 433 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 PLCB3Q01970 1234 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 STRN3Q13033 797 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 XKR9Q5GH70 373 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 HOOK3Q86VS8 718 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 TBC1D16Q8TBP0 767 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 PPLO60437 1756 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 TRAPPC10P48553 1259 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 FAM26FQ5R3K3 315 aa19.96■□□□□ 0.79
PTPDC1-202ENST00000375360 MEIS1O00470 390 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 LRRC41Q15345 812 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 GJA10Q969M2 543 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 SELENOOQ9BVL4 669 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 ARHGAP6O43182 974 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 MAGEA1P43355 309 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 ARHGAP44Q17R89 818 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 CYP26C1Q6V0L0 522 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 DHX37Q8IY37 1157 aaKnown RBP19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 MXD3Q9BW11 206 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 MLXIPQ9HAP2 919 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 PANK4Q9NVE7 773 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 FOSP01100 380 aaPredicted RBP19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 STAT2P52630 851 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 MROH7-TTC4A0A0A0MT08 1334 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 DKC1O60832 514 aaKnown RBP eCLIP19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 FAM102BQ5T8I3 360 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 SUGCTQ9HAC7 445 aa19.95■□□□□ 0.78
PTPDC1-202ENST00000375360 GOLGA6L10A0A0M3HER8 536 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 TNFAIP3P21580 790 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 GNPTABQ3T906 1256 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 LRCH2Q5VUJ6 765 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 FAM178BQ8IXR5 827 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 PLVAPQ9BX97 442 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 KDM3AQ9Y4C1 1321 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 CCDC66A2RUB6 948 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 POTEB2H3BUK9 544 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 ALX1Q15699 326 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 WDR44Q5JSH3 913 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 IMPACTQ9P2X3 320 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 CDC37Q16543 378 aaPredicted RBP19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 CCDC84Q86UT8 332 aaPredicted RBP19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 SLFN12Q8IYM2 578 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 ZNF526Q8TF50 670 aaPredicted RBP19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 MROH1Q8NDA8 1641 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 CASP1P29466 404 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 TYW1BQ6NUM6 668 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 TMEM87AQ8NBN3 555 aa19.94■□□□□ 0.78
PTPDC1-202ENST00000375360 DEPDC5O75140 1603 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 BMS1Q14692 1282 aaKnown RBP19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 SP8Q8IXZ3 490 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 USP42Q9H9J4 1324 aaKnown RBP19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 GOLGA8FQ08AF8 430 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 GOLGA8DPQ0D2H9 430 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 SLFN14P0C7P3 912 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 GBP2P32456 591 aaPredicted RBP19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 SLC9C1Q4G0N8 1177 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 TMTC1Q8IUR5 882 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 CEP112Q8N8E3 955 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 LMBR1Q8WVP7 490 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 ZNF341Q9BYN7 854 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 UTYO14607 1347 aa19.93■□□□□ 0.78
PTPDC1-202ENST00000375360 KLRK1P26718 216 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 KLHL30Q0D2K2 578 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 TRIM14Q14142 442 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 SYDE2Q5VT97 1194 aa19.92■□□□□ 0.78
PTPDC1-202ENST00000375360 SPATA1Q5VX52 437 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms