RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CCDC66A2RUB6 948 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 NEMFO60524 1076 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PLCG1P19174 1290 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 STAT3P40763 770 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 CABP7Q86V35 215 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 ACRBPQ8NEB7 543 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PPP1R13BQ96KQ4 1090 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 GDAP1L1Q96MZ0 367 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 CARD6Q9BX69 1037 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 MAGEC2Q9UBF1 373 aaPredicted RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 GUCA1BQ9UMX6 200 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 RBAK-RBAKDNI3L0D1 243 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 ACTN4O43707 911 aaKnown RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 CFBP00751 764 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 TPM1P09493 284 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 SLFN14P0C7P3 912 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 MCM6Q14566 821 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 ANKRD13CQ8N6S4 541 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 ANKRD20A12PQ8NF67 263 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PCDHA6Q9UN73 950 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PCDHA4Q9UN74 947 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PCDHA8Q9Y5H6 950 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 SFI1A8K8P3 1242 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 BBOX1O75936 387 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 DDAH1O94760 285 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 CAVIN2O95810 425 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 CALML3P27482 149 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 PRCPP42785 496 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 NONOQ15233 471 aaKnown RBP eCLIP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 EZH2Q15910 746 aaKnown RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 TSR1Q2NL82 804 aaKnown RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 ARHGAP29Q52LW3 1261 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 RC3H1Q5TC82 1133 aaKnown RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 FAM207AQ9NSI2 230 aaPredicted RBP12.16□□□□□ -0.46
CXCL12-203ENST00000374429 HPSEQ9Y251 543 aa12.16□□□□□ -0.46
CXCL12-203ENST00000374429 MATR3P43243 847 aaKnown RBP eCLIP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 KLK7P49862 253 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 GSDMDP57764 484 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 FUT2Q10981 343 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 SNX29Q8TEQ0 813 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 KIFC2Q96AC6 838 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 CAPZA3Q96KX2 299 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 LRWD1Q9UFC0 647 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 DACH1Q9UI36 760 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 CEP350Q5VT06 3117 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 NUP98P52948 1817 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 DDTLA6NHG4 134 aaPredicted RBP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 POLRMTO00411 1230 aaKnown RBP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 ENC1O14682 589 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 RPN1P04843 607 aaKnown RBP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 TRIM21P19474 475 aaKnown RBP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 CDC42EP5Q6NZY7 148 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 CDAN1Q8IWY9 1227 aa12.15□□□□□ -0.46
CXCL12-203ENST00000374429 XIRP1Q702N8 1843 aaKnown RBP12.15□□□□□ -0.46
CXCL12-203ENST00000374429 NPHP3-ACAD11A0A0J9YXS1 232 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 KIF4BQ2VIQ3 1234 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 CERKLQ49MI3 558 aaPredicted RBP12.15□□□□□ -0.47
CXCL12-203ENST00000374429 PRR16Q569H4 304 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 LARGE2Q8N3Y3 721 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 EXOC1Q9NV70 894 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.15□□□□□ -0.47
CXCL12-203ENST00000374429 PCDHA1Q9Y5I3 950 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 GJA3Q9Y6H8 435 aa12.15□□□□□ -0.47
CXCL12-203ENST00000374429 ERICH4A6NGS2 130 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 POLR3GO15318 223 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-203ENST00000374429 GH2P01242 217 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 PMS1P54277 932 aaKnown RBP12.14□□□□□ -0.47
CXCL12-203ENST00000374429 RNASE9P60153 205 aaKnown RBP12.14□□□□□ -0.47
CXCL12-203ENST00000374429 CALCRLQ16602 461 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 SPECC1LQ69YQ0 1117 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 ZNF710Q8N1W2 664 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 CSGALNACT2Q8N6G5 542 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 TIGD1Q96MW7 591 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 B4DLN1 442 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 ABL1P00519 1130 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 KRT9P35527 623 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 CRKP46108 304 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 DGKZQ13574 1117 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 ZNF569Q5MCW4 686 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 MLKLQ8NB16 471 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 GLIS3Q8NEA6 775 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 MED15Q96RN5 788 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 CSRNP1Q96S65 589 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 FEZ1Q99689 392 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 SEMA3EO15041 775 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 PAK1Q13153 545 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 TCERG1LQ5VWI1 586 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.14□□□□□ -0.47
CXCL12-203ENST00000374429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.14□□□□□ -0.47
CXCL12-203ENST00000374429 CCDC155Q8N6L0 562 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 CCDC148Q8NFR7 591 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 NUDT12Q9BQG2 462 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 INTS13Q9NVM9 706 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 TRIM10Q9UDY6 481 aa12.14□□□□□ -0.47
CXCL12-203ENST00000374429 ITGB4P16144 1822 aa12.13□□□□□ -0.47
CXCL12-203ENST00000374429 WDR19Q8NEZ3 1342 aa12.13□□□□□ -0.47
CXCL12-203ENST00000374429 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
CXCL12-203ENST00000374429 CYP27A1Q02318 531 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms