RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 PAXBP1Q9Y5B6 917 aa18.07■□□□□ 0.48
CNKSR1-202ENST00000374253 ALDH1B1P30837 517 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 SHMT1P34896 483 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 PDE6BP35913 854 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TECP42680 631 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 NR1I3Q14994 352 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 NONOQ15233 471 aaKnown RBP eCLIP18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 KCTD1Q719H9 257 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TC2NQ8N9U0 490 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TEKT1Q969V4 418 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 MASTLQ96GX5 879 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TMX4Q9H1E5 349 aaPredicted RBP18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TRIM49BA6NDI0 452 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TBX2Q13207 712 aaPredicted RBP18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 C2CD5Q86YS7 1000 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 TMEM139Q8IV31 216 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 PDCL3Q9H2J4 239 aa18.06■□□□□ 0.48
CNKSR1-202ENST00000374253 CRKP46108 304 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 A0A1B0GTH6 734 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 CTIFO43310 598 aaKnown RBP18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 MYO1BO43795 1136 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 PRCPP42785 496 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 UBE2SQ16763 222 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 CCDC96Q2M329 555 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 REXO1Q8N1G1 1221 aaKnown RBP18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 NELFBQ8WX92 580 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 BAG1Q99933 345 aaPredicted RBP18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 DESI2Q9BSY9 194 aa18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 COL11A2P13942 1736 aaPredicted RBP18.05■□□□□ 0.48
CNKSR1-202ENST00000374253 GNA11P29992 359 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 NT5C2P49902 561 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 MTF1Q14872 753 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 GALNT17Q6IS24 598 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 TOGARAM2Q6ZUX3 1019 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 KRT25Q7Z3Z0 450 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 NEK8Q86SG6 692 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 KIF18AQ8NI77 898 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 CCDC12Q8WUD4 166 aaPredicted RBP18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 GJA10Q969M2 543 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 VPS16Q9H269 839 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 OR52Z1P0C646 297 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 PLCG1P19174 1290 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 TXKP42681 527 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 NCBP1Q09161 790 aaKnown RBP18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 CDKAL1Q5VV42 579 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 ZSCAN29Q8IWY8 852 aaPredicted RBP18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 RIOX1Q9H6W3 641 aa18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 ZNF215Q9UL58 517 aaPredicted RBP18.04■□□□□ 0.48
CNKSR1-202ENST00000374253 PSDA5PKW4 1024 aaPredicted RBP18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 TTLL1O95922 423 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 CABP7Q86V35 215 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 DNAJC18Q9H819 358 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 TAB2Q9NYJ8 693 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 DDTLA6NHG4 134 aaPredicted RBP18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 PPP1R11O60927 126 aaPredicted RBP18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 TDP2O95551 362 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 PMS1P54277 932 aaKnown RBP18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 RBL2Q08999 1139 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 PAK1Q13153 545 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 KMT5BQ4FZB7 885 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 ADGRF4Q8IZF3 695 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 IGSF22Q8N9C0 903 aa18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 ADD3Q9UEY8 706 aaKnown RBP18.03■□□□□ 0.48
CNKSR1-202ENST00000374253 MYH8P13535 1937 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 IGKV6D-41A0A0C4DH26 115 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 NOVP48745 357 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 TNNI2P48788 182 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 ZNF658Q5TYW1 1059 aaPredicted RBP18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 JMJD4Q9H9V9 463 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 DNAI1Q9UI46 699 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 FOCADQ5VW36 1801 aa18.02■□□□□ 0.48
CNKSR1-202ENST00000374253 USP17L10C9JJH3 530 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 PLSCR1O15162 318 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 SLC37A4O43826 429 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 KRT31Q15323 416 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 LRRN4CLQ8ND94 238 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 HPS3Q969F9 1004 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 KCND1Q9NSA2 647 aa18.02■□□□□ 0.47
CNKSR1-202ENST00000374253 FANCGO15287 622 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 ECE2O60344 883 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 HLA-DOAP06340 250 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 AOC3Q16853 763 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 SUGT1Q9Y2Z0 365 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 SOWAHDA6NJG2 315 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 ADCY7P51828 1080 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 ZNF543Q08ER8 600 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 REXO1L1PQ8IX06 675 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 PPP2R2CQ9Y2T4 447 aa18.01■□□□□ 0.47
CNKSR1-202ENST00000374253 N4BP3O15049 544 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 SNAP25P60880 206 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 ASPRV1Q53RT3 343 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 HHIPL2Q6UWX4 724 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 PYM1Q9BRP8 204 aaKnown RBP18■□□□□ 0.47
CNKSR1-202ENST00000374253 RWDD2AQ9UIY3 292 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 SCN9AQ15858 1988 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 A0A0U1RQJ8 604 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 PES1O00541 588 aaKnown RBP18■□□□□ 0.47
CNKSR1-202ENST00000374253 ARHGAP6O43182 974 aa18■□□□□ 0.47
CNKSR1-202ENST00000374253 EDIL3O43854 480 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms