RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 RGPD2P0DJD1 1756 aa19.74■□□□□ 0.75
TRAF3IP1-201ENST00000373327 POTEMA6NI47 508 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 IQCEQ6IPM2 695 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 IL17RAQ96F46 866 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CWC15Q9P013 229 aaKnown RBP19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 BUB1O43683 1085 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 FGFR2P21802 821 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 RGS22Q8NE09 1264 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CFBP00751 764 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CNNM4Q6P4Q7 775 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 RDH13Q8NBN7 331 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 LRRN4CLQ8ND94 238 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 WDR19Q8NEZ3 1342 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SALL1Q9NSC2 1324 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 GDF11O95390 407 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CXCR5P32302 372 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CLEC4GQ6UXB4 293 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CNOT6LQ96LI5 555 aaKnown RBP19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TSPYL1Q9H0U9 437 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 NARFQ9UHQ1 456 aa19.73■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PNPLA7Q6ZV29 1317 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 STK36Q9NRP7 1315 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 COL5A2P05997 1499 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CEP95Q96GE4 821 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PRR16Q569H4 304 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SMCR8Q8TEV9 937 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 MAP3K14Q99558 947 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 RPS6KA4O75676 772 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 IBSPP21815 317 aaPredicted RBP19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SSR1P43307 286 aaKnown RBP19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CAMTA1Q9Y6Y1 1673 aa19.72■□□□□ 0.75
TRAF3IP1-201ENST00000373327 MEIS1O00470 390 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 LONP1P36776 959 aaKnown RBP19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PFKFB3Q16875 520 aaPredicted RBP19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 VGLL2Q8N8G2 317 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TUBE1Q9UJT0 475 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 H0YHG0 523 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SRGAP2O75044 1071 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TUBB4AP04350 444 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 SMC1AQ14683 1233 aaKnown RBP19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 MAP9Q49MG5 647 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PCDHA12Q9UN75 941 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 MAGEA1P43355 309 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 NCAPHQ15003 741 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 CCDC174Q6PII3 467 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 GTPBP4Q9BZE4 634 aaKnown RBP19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 RSPH14Q9UHP6 348 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PARP3Q9Y6F1 533 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 PSTPIP2Q9H939 334 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 GOPCQ9HD26 462 aa19.71■□□□□ 0.75
TRAF3IP1-201ENST00000373327 TXNRD1Q16881 649 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CPXCR1Q8N123 301 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 DISC1Q9NRI5 854 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 HOMER2Q9NSB8 354 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PPP1R12BO60237 982 aaPredicted RBP19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TROAPQ12815 778 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CACNA1FO60840 1977 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 FAM208AQ9UK61 1670 aaKnown RBP19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 H7C1D1 291 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PARD6BQ9BYG5 372 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TMEM60Q9H2L4 133 aa19.7■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CD44P16070 742 aaKnown RBP19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 MAATS1Q7Z4T9 603 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 IFIH1Q9BYX4 1025 aaKnown RBP19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CD209Q9NNX6 404 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 KIAA1024Q9UPX6 916 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 FXR1P51114 621 aaKnown RBP eCLIP19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 GRAPQ13588 217 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ZNF658Q5TYW1 1059 aaPredicted RBP19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 GRAPLQ8TC17 118 aaPredicted RBP19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 EFCAB8A8MWE9 144 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 FCER1AP12319 257 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 MRPL44Q9H9J2 332 aaKnown RBP19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PCDHB13Q9Y5F0 798 aa19.69■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TMEM110-MUSTN1A8MSY1 372 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TMEM132AQ24JP5 1023 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TAX1BP1Q86VP1 789 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CHP1Q99653 195 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PHF20Q9BVI0 1012 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 CCDC113Q9H0I3 377 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 PCDHA1Q9Y5I3 950 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SPATA31A1Q5TZJ5 1347 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SF3A3Q12874 501 aaKnown RBP eCLIP19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 EHBP1Q8NDI1 1231 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 BPIFA3Q9BQP9 254 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TRIM10Q9UDY6 481 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 MFAP3LO75121 409 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 GPSM2P81274 684 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 TCP11X2Q5H9J9 407 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 GPBP1Q86WP2 473 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ERMNQ8TAM6 284 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 HDAC6Q9UBN7 1215 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 GOLGA6L10A6NI86 522 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 ACTN4O43707 911 aaKnown RBP19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 SECISBP2LQ93073 1101 aaKnown RBP19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 RIOK1Q9BRS2 568 aaKnown RBP19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 LEMD3Q9Y2U8 911 aa19.68■□□□□ 0.74
TRAF3IP1-201ENST00000373327 USP17L15C9J2P7 530 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms