RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 GPATCH4Q5T3I0 446 aaKnown RBP23.49■■□□□ 1.35
TMEM53-205ENST00000372244 NCOA7Q8NI08 942 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 RANBP17Q9H2T7 1088 aaKnown RBP23.49■■□□□ 1.35
TMEM53-205ENST00000372244 KAT14Q9H8E8 782 aa23.49■■□□□ 1.35
TMEM53-205ENST00000372244 CDC45O75419 566 aa23.48■■□□□ 1.35
TMEM53-205ENST00000372244 CCND3P30281 292 aaPredicted RBP23.48■■□□□ 1.35
TMEM53-205ENST00000372244 SNAP25P60880 206 aa23.48■■□□□ 1.35
TMEM53-205ENST00000372244 SYDE2Q5VT97 1194 aa23.48■■□□□ 1.35
TMEM53-205ENST00000372244 LHX8Q68G74 356 aa23.48■■□□□ 1.35
TMEM53-205ENST00000372244 SLC4A3P48751 1232 aa23.47■■□□□ 1.35
TMEM53-205ENST00000372244 TKFCQ3LXA3 575 aa23.47■■□□□ 1.35
TMEM53-205ENST00000372244 TRPV1Q8NER1 839 aa23.47■■□□□ 1.35
TMEM53-205ENST00000372244 ANO2Q9NQ90 1003 aa23.47■■□□□ 1.35
TMEM53-205ENST00000372244 OGDHLQ9ULD0 1010 aa23.47■■□□□ 1.35
TMEM53-205ENST00000372244 ZNFX1Q9P2E3 1918 aaKnown RBP23.47■■□□□ 1.35
TMEM53-205ENST00000372244 ICAM1P05362 532 aa23.46■■□□□ 1.35
TMEM53-205ENST00000372244 IFIT1BQ5T764 474 aaKnown RBP23.46■■□□□ 1.35
TMEM53-205ENST00000372244 DDX11Q96FC9 970 aa23.46■■□□□ 1.35
TMEM53-205ENST00000372244 SLC27A2O14975 620 aa23.45■■□□□ 1.34
TMEM53-205ENST00000372244 CYBAP13498 195 aa23.45■■□□□ 1.34
TMEM53-205ENST00000372244 CCDC174Q6PII3 467 aa23.45■■□□□ 1.34
TMEM53-205ENST00000372244 CASC1Q6TDU7 716 aa23.45■■□□□ 1.34
TMEM53-205ENST00000372244 RALYLQ86SE5 291 aaKnown RBP23.45■■□□□ 1.34
TMEM53-205ENST00000372244 MB21D2Q8IYB1 491 aaPredicted RBP23.45■■□□□ 1.34
TMEM53-205ENST00000372244 TRERF1Q96PN7 1200 aa23.45■■□□□ 1.34
TMEM53-205ENST00000372244 GOLGA8HP0CJ92 632 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 CREB3L3Q68CJ9 461 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 ANKRD35Q8N283 1001 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 ANKLE1Q8NAG6 615 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 IGDCC4Q8TDY8 1250 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 TINF2Q9BSI4 451 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 ACAD9Q9H845 621 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 HOMER2Q9NSB8 354 aa23.44■■□□□ 1.34
TMEM53-205ENST00000372244 IFIT3O14879 490 aaKnown RBP23.43■■□□□ 1.34
TMEM53-205ENST00000372244 MNX1P50219 401 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-205ENST00000372244 ANTXR2P58335 489 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 ASPRV1Q53RT3 343 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 MAMDC4Q6UXC1 1216 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 MSL3Q8N5Y2 521 aaKnown RBP23.43■■□□□ 1.34
TMEM53-205ENST00000372244 RNF146Q9NTX7 359 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 NRBP1Q9UHY1 535 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 FARP2O94887 1054 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-205ENST00000372244 ALAS1P13196 640 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 ZNF467Q7Z7K2 595 aaPredicted RBP23.43■■□□□ 1.34
TMEM53-205ENST00000372244 MTA3Q9BTC8 594 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 UBA5Q9GZZ9 404 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 CCPG1Q9ULG6 757 aa23.43■■□□□ 1.34
TMEM53-205ENST00000372244 PARP1P09874 1014 aaKnown RBP23.42■■□□□ 1.34
TMEM53-205ENST00000372244 MUM1L1Q5H9M0 696 aa23.42■■□□□ 1.34
TMEM53-205ENST00000372244 PRAMEF19Q5SWL8 479 aa23.42■■□□□ 1.34
TMEM53-205ENST00000372244 CHST3Q7LGC8 479 aa23.42■■□□□ 1.34
TMEM53-205ENST00000372244 FGD4Q96M96 766 aa23.42■■□□□ 1.34
TMEM53-205ENST00000372244 SENP2Q9HC62 589 aa23.42■■□□□ 1.34
TMEM53-205ENST00000372244 A1CFQ9NQ94 594 aaKnown RBP23.42■■□□□ 1.34
TMEM53-205ENST00000372244 PNMA2Q9UL42 364 aa23.42■■□□□ 1.34
TMEM53-205ENST00000372244 MSCO60682 206 aa23.41■■□□□ 1.34
TMEM53-205ENST00000372244 SART3Q15020 963 aaKnown RBP23.41■■□□□ 1.34
TMEM53-205ENST00000372244 TSGA10IPQ3SY00 556 aa23.41■■□□□ 1.34
TMEM53-205ENST00000372244 FAM133AQ8N9E0 248 aa23.41■■□□□ 1.34
TMEM53-205ENST00000372244 CPVLQ9H3G5 476 aa23.41■■□□□ 1.34
TMEM53-205ENST00000372244 DDX20Q9UHI6 824 aaKnown RBP23.41■■□□□ 1.34
TMEM53-205ENST00000372244 ERICH2A1L162 156 aa23.4■■□□□ 1.34
TMEM53-205ENST00000372244 CNGA1P29973 690 aa23.4■■□□□ 1.34
TMEM53-205ENST00000372244 COL9A3Q14050 684 aaPredicted RBP23.4■■□□□ 1.34
TMEM53-205ENST00000372244 ADGRF4Q8IZF3 695 aa23.4■■□□□ 1.34
TMEM53-205ENST00000372244 SMCHD1A6NHR9 2005 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 PALM3A6NDB9 673 aaPredicted RBP23.39■■□□□ 1.34
TMEM53-205ENST00000372244 SEPT4O43236 478 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 SNAI1O95863 264 aaPredicted RBP23.39■■□□□ 1.34
TMEM53-205ENST00000372244 CNTN2Q02246 1040 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 TROAPQ12815 778 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 WTAPQ15007 396 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 TMEM67Q5HYA8 995 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 STAG2Q8N3U4 1231 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 PAWRQ96IZ0 340 aaKnown RBP23.39■■□□□ 1.34
TMEM53-205ENST00000372244 CYP39A1Q9NYL5 469 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 MAD2L2Q9UI95 211 aa23.39■■□□□ 1.34
TMEM53-205ENST00000372244 WDR19Q8NEZ3 1342 aa23.39■■□□□ 1.33
TMEM53-205ENST00000372244 SYNGAP1Q96PV0 1343 aa23.39■■□□□ 1.33
TMEM53-205ENST00000372244 TAL1P17542 331 aaPredicted RBP23.38■■□□□ 1.33
TMEM53-205ENST00000372244 MCM5P33992 734 aa23.38■■□□□ 1.33
TMEM53-205ENST00000372244 RNF20Q5VTR2 975 aa23.38■■□□□ 1.33
TMEM53-205ENST00000372244 DIS3LQ8TF46 1054 aaKnown RBP23.38■■□□□ 1.33
TMEM53-205ENST00000372244 CLEC4DQ8WXI8 215 aa23.38■■□□□ 1.33
TMEM53-205ENST00000372244 PFASO15067 1338 aa23.38■■□□□ 1.33
TMEM53-205ENST00000372244 POTEB2H3BUK9 544 aa23.37■■□□□ 1.33
TMEM53-205ENST00000372244 ZNF865P0CJ78 1059 aaPredicted RBP23.37■■□□□ 1.33
TMEM53-205ENST00000372244 NECAB2Q7Z6G3 386 aa23.37■■□□□ 1.33
TMEM53-205ENST00000372244 JMJD4Q9H9V9 463 aa23.37■■□□□ 1.33
TMEM53-205ENST00000372244 LY9Q9HBG7 655 aa23.37■■□□□ 1.33
TMEM53-205ENST00000372244 KLRF2D3W0D1 207 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 PRC1O43663 620 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 RASEFQ8IZ41 740 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 KCNB2Q92953 911 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 GPHNQ9NQX3 736 aaPredicted RBP23.36■■□□□ 1.33
TMEM53-205ENST00000372244 SOWAHBA6NEL2 793 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 GRM4Q14833 912 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 TMTC2Q8N394 836 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 MTMR8Q96EF0 704 aa23.36■■□□□ 1.33
TMEM53-205ENST00000372244 TMEM87BQ96K49 555 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms