RNA–Protein interactions for RNA: ENST00000361168.9

CLK2-202, Transcript of CDC like kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLK2, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK2-202ENST00000361168 CDC37Q16543 378 aaPredicted RBP20.79■□□□□ 0.92
CLK2-202ENST00000361168 GTF3C6Q969F1 213 aa20.79■□□□□ 0.92
CLK2-202ENST00000361168 TMX3Q96JJ7 454 aa20.79■□□□□ 0.92
CLK2-202ENST00000361168 MYPNQ86TC9 1320 aa20.79■□□□□ 0.92
CLK2-202ENST00000361168 ERVK-9P63128 1117 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 ERVK-24P63145 666 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 QRICH1Q2TAL8 776 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 CCDC83Q8IWF9 413 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 BEGAINQ9BUH8 593 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 ARHGAP39Q9C0H5 1083 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 RBM28Q9NW13 759 aaKnown RBP20.78■□□□□ 0.92
CLK2-202ENST00000361168 CNTNAP5Q8WYK1 1306 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 FOXN1O15353 648 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 MTMR8Q96EF0 704 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 CFHR5Q9BXR6 569 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 MOV10L1Q9BXT6 1211 aaKnown RBP20.78■□□□□ 0.92
CLK2-202ENST00000361168 SPATC1LQ9H0A9 340 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 EFCC1Q9HA90 598 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 RABGAP1Q9Y3P9 1069 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 V9GY48 417 aaPredicted RBP20.78■□□□□ 0.92
CLK2-202ENST00000361168 A0A0G2JMZ2 1700 aa20.78■□□□□ 0.92
CLK2-202ENST00000361168 GCLCP48506 637 aaPredicted RBP20.77■□□□□ 0.92
CLK2-202ENST00000361168 USH1GQ495M9 461 aa20.77■□□□□ 0.92
CLK2-202ENST00000361168 SNRNP48Q6IEG0 339 aaKnown RBP20.77■□□□□ 0.92
CLK2-202ENST00000361168 SPZ1Q9BXG8 430 aa20.77■□□□□ 0.92
CLK2-202ENST00000361168 HOMER2Q9NSB8 354 aa20.77■□□□□ 0.92
CLK2-202ENST00000361168 JAK2O60674 1132 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 ZBED4O75132 1171 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 HSPA1AP0DMV8 641 aaKnown RBP20.76■□□□□ 0.91
CLK2-202ENST00000361168 HSPA1BP0DMV9 641 aaKnown RBP20.76■□□□□ 0.91
CLK2-202ENST00000361168 FAM110CQ1W6H9 321 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 GPRC5AQ8NFJ5 357 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 SAGE1Q9NXZ1 904 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 MORF4L1Q9UBU8 362 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 GPR25O00155 361 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 STAT3P40763 770 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 GNAQP50148 359 aa20.76■□□□□ 0.91
CLK2-202ENST00000361168 ZNF296Q8WUU4 475 aaPredicted RBP20.76■□□□□ 0.91
CLK2-202ENST00000361168 ZSWIM8A7E2V4 1837 aa20.75■□□□□ 0.91
CLK2-202ENST00000361168 ZBTB5O15062 677 aa20.75■□□□□ 0.91
CLK2-202ENST00000361168 GPKOWQ92917 476 aaPredicted RBP eCLIP20.75■□□□□ 0.91
CLK2-202ENST00000361168 COA7Q96BR5 231 aa20.75■□□□□ 0.91
CLK2-202ENST00000361168 CCDC196A0A1B0GTZ2 297 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 CPLX1O14810 134 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 IFNAR1P17181 557 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 MB21D1Q8N884 522 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 AIFM3Q96NN9 605 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 LZTS2Q9BRK4 669 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 SLC26A6Q9BXS9 759 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 TEX13BQ9BXU2 312 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 CCPG1Q9ULG6 757 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 ICAM1P05362 532 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 ERCC3P19447 782 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 PPP2R5BQ15173 497 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 PKN1Q16512 942 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 MUM1L1Q5H9M0 696 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 TYW1BQ6NUM6 668 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 NSUN7Q8NE18 718 aaKnown RBP20.74■□□□□ 0.91
CLK2-202ENST00000361168 SHISA4Q96DD7 197 aa20.74■□□□□ 0.91
CLK2-202ENST00000361168 CTDP1Q9Y5B0 961 aaPredicted RBP20.74■□□□□ 0.91
CLK2-202ENST00000361168 ALAS1P13196 640 aa20.73■□□□□ 0.91
CLK2-202ENST00000361168 SP3Q02447 781 aa20.73■□□□□ 0.91
CLK2-202ENST00000361168 NCAPG2Q86XI2 1143 aa20.73■□□□□ 0.91
CLK2-202ENST00000361168 RRP36Q96EU6 259 aaKnown RBP20.73■□□□□ 0.91
CLK2-202ENST00000361168 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
CLK2-202ENST00000361168 GJB4Q9NTQ9 266 aa20.73■□□□□ 0.91
CLK2-202ENST00000361168 PNMA6FA0A0J9YX94 578 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 ATP2A1O14983 1001 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 FDPSP14324 419 aaKnown RBP20.72■□□□□ 0.91
CLK2-202ENST00000361168 SMARCA1P28370 1054 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 LACTBP83111 547 aaPredicted RBP20.72■□□□□ 0.91
CLK2-202ENST00000361168 WDR78Q5VTH9 848 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 ZSCAN31Q96LW9 406 aaPredicted RBP20.72■□□□□ 0.91
CLK2-202ENST00000361168 NFIBO00712 420 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 RIOX2Q8IUF8 465 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 CD99L2Q8TCZ2 262 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 TBC1D5Q92609 795 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 TRIM47Q96LD4 638 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 PCDHA1Q9Y5I3 950 aa20.72■□□□□ 0.91
CLK2-202ENST00000361168 OPLAHO14841 1288 aa20.71■□□□□ 0.91
CLK2-202ENST00000361168 WWC2Q6AWC2 1192 aa20.71■□□□□ 0.91
CLK2-202ENST00000361168 FBXO11Q86XK2 927 aa20.71■□□□□ 0.91
CLK2-202ENST00000361168 GTF3C2Q8WUA4 911 aaPredicted RBP20.71■□□□□ 0.91
CLK2-202ENST00000361168 SH2B1Q9NRF2 756 aaPredicted RBP20.71■□□□□ 0.91
CLK2-202ENST00000361168 PTPDC1A2A3K4 754 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 ADAMTS3O15072 1205 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 HSPA8P11142 646 aaKnown RBP20.7■□□□□ 0.91
CLK2-202ENST00000361168 LBX1P52954 281 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 SNX21Q969T3 373 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 TRERF1Q96PN7 1200 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 AMNQ9BXJ7 453 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.91
CLK2-202ENST00000361168 K7ELQ4 463 aaPredicted RBP20.7■□□□□ 0.9
CLK2-202ENST00000361168 PRPF3O43395 683 aaKnown RBP20.7■□□□□ 0.9
CLK2-202ENST00000361168 FMNL1O95466 1100 aaPredicted RBP20.7■□□□□ 0.9
CLK2-202ENST00000361168 FDX1P10109 184 aa20.7■□□□□ 0.9
CLK2-202ENST00000361168 MCM2P49736 904 aa20.7■□□□□ 0.9
CLK2-202ENST00000361168 OAZ1P54368 228 aa20.7■□□□□ 0.9
CLK2-202ENST00000361168 HEATR3Q7Z4Q2 680 aa20.7■□□□□ 0.9
CLK2-202ENST00000361168 CLEC4DQ8WXI8 215 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms