RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 TRIM6Q9C030 488 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 RNF41Q9H4P4 317 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 ANKRD36CQ5JPF3 1778 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 COL5A2P05997 1499 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 BCL9LQ86UU0 1499 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 TRIM75PA6NK02 468 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 PPP1R3GB7ZBB8 358 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 IRS4O14654 1257 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 PDE8AO60658 829 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 STARD3NLO95772 234 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 CDR1P51861 262 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 EPHB4P54760 987 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 IRX1P78414 480 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 SNCBQ16143 134 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 RNF187Q5TA31 235 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 MAGEB6Q8N7X4 407 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 FANCBQ8NB91 859 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 FERMT2Q96AC1 680 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 ZNF330Q9Y3S2 320 aaPredicted RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 HSF2BPO75031 334 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 XBP1P17861 261 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 ATP1A2P50993 1020 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 ITIH3Q06033 890 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 C6orf89Q6UWU4 347 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 SYNE4Q8N205 404 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 RBM28Q9NW13 759 aaKnown RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 TMOD3Q9NYL9 352 aa16.36■□□□□ 0.21
TOP3B-201ENST00000357179 DMGDHQ9UI17 866 aaKnown RBP16.36■□□□□ 0.21
TOP3B-201ENST00000357179 TLDC1Q6P9B6 456 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 USP49Q70CQ1 688 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 CCDC50Q8IVM0 306 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 DNAJC10Q8IXB1 793 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 ZNF654Q8IZM8 581 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 HDAC7Q8WUI4 952 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 CAVIN3Q969G5 261 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 PAGE5Q96GU1 130 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 RNPC3Q96LT9 517 aaKnown RBP16.35■□□□□ 0.21
TOP3B-201ENST00000357179 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 TOGARAM1Q9Y4F4 1720 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 A0A1B0GUA9 196 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 DPYDQ12882 1025 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 NNTQ13423 1086 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 PTGISQ16647 500 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 NAIF1Q69YI7 327 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-201ENST00000357179 ZNF572Q7Z3I7 529 aaPredicted RBP16.35■□□□□ 0.21
TOP3B-201ENST00000357179 FAM228AQ86W67 206 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 SH2D3CQ8N5H7 860 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 CENPHQ9H3R5 247 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 ARMT1Q9H993 441 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 BCORQ6W2J9 1755 aa16.35■□□□□ 0.21
TOP3B-201ENST00000357179 SRRM3A6NNA2 597 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-201ENST00000357179 PPP1R37O75864 691 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 SLC5A1P13866 664 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 COPB1P53618 953 aaKnown RBP16.34■□□□□ 0.21
TOP3B-201ENST00000357179 EZH2Q15910 746 aaKnown RBP16.34■□□□□ 0.21
TOP3B-201ENST00000357179 PARP9Q8IXQ6 854 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 MYCBPAPQ8TBZ2 947 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 OXER1Q8TDS5 423 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 CCT8L2Q96SF2 557 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 ACTR5Q9H9F9 607 aaPredicted RBP16.34■□□□□ 0.21
TOP3B-201ENST00000357179 TFR2Q9UP52 801 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 RTL9Q8NET4 1388 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 KRT86O43790 486 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 HLFQ16534 295 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 CYB5D1Q6P9G0 228 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 NLRP14Q86W24 1093 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 ZIM3Q96PE6 472 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 HINFPQ9BQA5 517 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 LRRC1Q9BTT6 524 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 SLC24A3Q9HC58 644 aa16.34■□□□□ 0.21
TOP3B-201ENST00000357179 EZRP15311 586 aaKnown RBP16.33■□□□□ 0.21
TOP3B-201ENST00000357179 GUCY1A3Q02108 690 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 IFT88Q13099 833 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 CEP57Q86XR8 500 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 FUKQ8N0W3 1084 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 OR8K1Q8NGG5 319 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 RNF217Q8TC41 542 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 VPS16Q9H269 839 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 ATP6V0A4Q9HBG4 840 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 PRDM11Q9NQV5 511 aa16.33■□□□□ 0.21
TOP3B-201ENST00000357179 COL22A1Q8NFW1 1626 aaPredicted RBP16.33■□□□□ 0.2
TOP3B-201ENST00000357179 CLNS1AP54105 237 aaKnown RBP16.33■□□□□ 0.2
TOP3B-201ENST00000357179 KRT83P78385 493 aa16.33■□□□□ 0.2
TOP3B-201ENST00000357179 SPAG1Q07617 926 aa16.33■□□□□ 0.2
TOP3B-201ENST00000357179 CREG2Q8IUH2 290 aa16.33■□□□□ 0.2
TOP3B-201ENST00000357179 SMYD4Q8IYR2 804 aaPredicted RBP16.33■□□□□ 0.2
TOP3B-201ENST00000357179 FNBP4Q8N3X1 1017 aaPredicted RBP16.33■□□□□ 0.2
TOP3B-201ENST00000357179 DNAJC7Q99615 494 aa16.33■□□□□ 0.2
TOP3B-201ENST00000357179 PHF20Q9BVI0 1012 aa16.33■□□□□ 0.2
TOP3B-201ENST00000357179 A0A087X0B3 334 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 GOLGA6L7A0A1B0GV03 622 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 FAM107AO95990 144 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 PDHBP11177 359 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 TNFRSF8P28908 595 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 KRT2P35908 639 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 HDLBPQ00341 1268 aaKnown RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 MAP2K1Q02750 393 aaPredicted RBP16.32■□□□□ 0.2
TOP3B-201ENST00000357179 RASGRF1Q13972 1273 aa16.32■□□□□ 0.2
TOP3B-201ENST00000357179 NBPF20Q3BBV1 942 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms