RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 UTP14AQ9BVJ6 771 aaKnown RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 PDCL3Q9H2J4 239 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 RCOR1Q9UKL0 485 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 PACSIN2Q9UNF0 486 aaPredicted RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 PTPRCP08575 1304 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 DNAJC13O75165 2243 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 ZFYVE26Q68DK2 2539 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 PCCAP05165 728 aaPredicted RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 HNRNPH2P55795 449 aaKnown RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 MAP3K10Q02779 954 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 COPRSQ9NQ92 184 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 ANGEL1Q9UNK9 670 aaKnown RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 WDR81Q562E7 1941 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 AGPSO00116 658 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 HYOU1Q9Y4L1 999 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 TMEM150BA6NC51 233 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 SKILP12757 684 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 CACNB1Q02641 598 aaPredicted RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 RRP1BQ14684 758 aaKnown RBP6.54□□□□□ -1.36
CD47-201ENST00000355354 KIF18AQ8NI77 898 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 CARD6Q9BX69 1037 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 LOXHD1Q8IVV2 1947 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 CCDC88CQ9P219 2028 aa6.54□□□□□ -1.36
CD47-201ENST00000355354 KNTC1P50748 2209 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 STK36Q9NRP7 1315 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 UBE2HP62256 183 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 RAD51AP2Q09MP3 1159 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 PPP1R13LQ8WUF5 828 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 GPKOWQ92917 476 aaPredicted RBP eCLIP6.53□□□□□ -1.362e-6■■■□□ 15.9
CD47-201ENST00000355354 KIFC2Q96AC6 838 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 DBF4Q9UBU7 674 aaPredicted RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 DDX41Q9UJV9 622 aaKnown RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 TISP43B9A030 160 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 AADACL2Q6P093 401 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 APOA5Q6Q788 366 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 ADAM33Q9BZ11 813 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 CIZ1Q9ULV3 898 aaPredicted RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 USP17L3A6NCW0 530 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 USP17L4A6NCW7 530 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 TRAF5O00463 557 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 PPEF1O14829 653 aaPredicted RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 CREB1P16220 341 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 ARHGAP25P42331 645 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 KIF23Q02241 960 aaPredicted RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 PARP10Q53GL7 1025 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 USP17L1Q7RTZ2 530 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 RIC3Q7Z5B4 369 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 RASAL3Q86YV0 1011 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 KBTBD3Q8NAB2 608 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 PLBD2Q8NHP8 589 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 TGFBRAP1Q8WUH2 860 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 RRP36Q96EU6 259 aaKnown RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 HERPUD2Q9BSE4 406 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 TNNT1P13805 278 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 GTF2F1P35269 517 aaKnown RBP eCLIP6.53□□□□□ -1.36
CD47-201ENST00000355354 DACT2Q5SW24 774 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 CNTROBQ8N137 903 aa6.53□□□□□ -1.36
CD47-201ENST00000355354 CCAR2Q8N163 923 aaKnown RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 CLASRPQ8N2M8 674 aaKnown RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 UPF2Q9HAU5 1272 aaKnown RBP6.53□□□□□ -1.36
CD47-201ENST00000355354 ZNF202O95125 648 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 GYPCP04921 128 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 GPSM2P81274 684 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 CCDC173Q0VFZ6 552 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 KLHL10Q6JEL2 608 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 MAEAQ7L5Y9 396 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 TRMT1LQ7Z2T5 733 aaKnown RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 NEK1Q96PY6 1258 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 SETDB2Q96T68 719 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 HAUS7Q99871 368 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 METTL22Q9BUU2 404 aaPredicted RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 ANKZF1Q9H8Y5 726 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 ADARB2Q9NS39 739 aaKnown RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 HACL1Q9UJ83 578 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 HPSEQ9Y251 543 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 KLF18A0A0U1RQI7 1052 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 FLT3P36888 993 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 NRLP54845 237 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 PNMA8AQ86V59 439 aaPredicted RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 PGLYRP2Q96PD5 576 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 TSPY26PQ9H489 355 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 CACNA1DQ01668 2161 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 PCM1Q15154 2024 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 ZNF532Q9HCE3 1301 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 O00370 1275 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 RRP9O43818 475 aaKnown RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 CYP3A4P08684 503 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 USP17L8P0C7I0 530 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 H2AFXP16104 143 aaPredicted RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 GJA5P36382 358 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 VSNL1P62760 191 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 CCDC30Q5VVM6 783 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 SRBD1Q8N5C6 995 aaKnown RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 SH2D3CQ8N5H7 860 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 LY9Q9HBG7 655 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 LZTFL1Q9NQ48 299 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 SMC3Q9UQE7 1217 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 UNCXA6NJT0 531 aa6.52□□□□□ -1.37
CD47-201ENST00000355354 EIF4E1BA6NMX2 242 aaKnown RBP6.52□□□□□ -1.37
CD47-201ENST00000355354 DDX11L8A8MPP1 907 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms