RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 DIS3Q9Y2L1 958 aaKnown RBP23.74■■□□□ 1.39
HCFC1R1-202ENST00000354679 CNGA1P29973 690 aa23.73■■□□□ 1.39
HCFC1R1-202ENST00000354679 ZNF543Q08ER8 600 aa23.73■■□□□ 1.39
HCFC1R1-202ENST00000354679 PRPF38BQ5VTL8 546 aaKnown RBP23.73■■□□□ 1.39
HCFC1R1-202ENST00000354679 RBM8AQ9Y5S9 174 aaKnown RBP23.73■■□□□ 1.39
HCFC1R1-202ENST00000354679 TKFCQ3LXA3 575 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 LHX8Q68G74 356 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 CYB5R4Q7L1T6 521 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 ANKRD35Q8N283 1001 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 DIS3LQ8TF46 1054 aaKnown RBP23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 LSG1Q9H089 658 aaKnown RBP23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 RANBP17Q9H2T7 1088 aaKnown RBP23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 ACAD9Q9H845 621 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 RNF146Q9NTX7 359 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 TAF6LQ9Y6J9 622 aa23.72■■□□□ 1.39
HCFC1R1-202ENST00000354679 PLXNA1Q9UIW2 1896 aa23.71■■□□□ 1.39
HCFC1R1-202ENST00000354679 PAWRQ96IZ0 340 aaKnown RBP23.71■■□□□ 1.39
HCFC1R1-202ENST00000354679 TINF2Q9BSI4 451 aa23.71■■□□□ 1.39
HCFC1R1-202ENST00000354679 HTATIP2Q9BUP3 242 aa23.71■■□□□ 1.39
HCFC1R1-202ENST00000354679 DDX20Q9UHI6 824 aaKnown RBP23.71■■□□□ 1.39
HCFC1R1-202ENST00000354679 DNAJC25-GNG10A0A024R161 153 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 E7EWF7 191 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 MSCO60682 206 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 ALAS1P13196 640 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 GPATCH4Q5T3I0 446 aaKnown RBP23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 IFIT1BQ5T764 474 aaKnown RBP23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 NECAB2Q7Z6G3 386 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 RALYLQ86SE5 291 aaKnown RBP23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 TRERF1Q96PN7 1200 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 CCPG1Q9ULG6 757 aa23.7■■□□□ 1.38
HCFC1R1-202ENST00000354679 ICAM1P05362 532 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 GOLGA8HP0CJ92 632 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 MNX1P50219 401 aaPredicted RBP23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 SEC23AQ15436 765 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 PRAMEF19Q5SWL8 479 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 STOX1Q6ZVD7 989 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 NCOA7Q8NI08 942 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 NRBP1Q9UHY1 535 aa23.69■■□□□ 1.38
HCFC1R1-202ENST00000354679 SEPT4O43236 478 aa23.68■■□□□ 1.38
HCFC1R1-202ENST00000354679 CENPBP07199 599 aaPredicted RBP23.68■■□□□ 1.38
HCFC1R1-202ENST00000354679 ANO2Q9NQ90 1003 aa23.68■■□□□ 1.38
HCFC1R1-202ENST00000354679 A1CFQ9NQ94 594 aaKnown RBP23.68■■□□□ 1.38
HCFC1R1-202ENST00000354679 CEP290O15078 2479 aa23.68■■□□□ 1.38
HCFC1R1-202ENST00000354679 CDC45O75419 566 aa23.67■■□□□ 1.38
HCFC1R1-202ENST00000354679 TAL1P17542 331 aaPredicted RBP23.67■■□□□ 1.38
HCFC1R1-202ENST00000354679 CASC1Q6TDU7 716 aa23.67■■□□□ 1.38
HCFC1R1-202ENST00000354679 MSL3Q8N5Y2 521 aaKnown RBP23.67■■□□□ 1.38
HCFC1R1-202ENST00000354679 DPF3Q92784 378 aa23.67■■□□□ 1.38
HCFC1R1-202ENST00000354679 FRMPD3Q5JV73 1810 aa23.66■■□□□ 1.38
HCFC1R1-202ENST00000354679 ASPRV1Q53RT3 343 aa23.66■■□□□ 1.38
HCFC1R1-202ENST00000354679 MUM1L1Q5H9M0 696 aa23.66■■□□□ 1.38
HCFC1R1-202ENST00000354679 ZNF467Q7Z7K2 595 aaPredicted RBP23.66■■□□□ 1.38
HCFC1R1-202ENST00000354679 UBA5Q9GZZ9 404 aa23.66■■□□□ 1.38
HCFC1R1-202ENST00000354679 PFASO15067 1338 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 SYNGAP1Q96PV0 1343 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 ERICH2A1L162 156 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 POTEB2H3BUK9 544 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 IFIT3O14879 490 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 PARP1P09874 1014 aaKnown RBP23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 MAMDC4Q6UXC1 1216 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 MB21D2Q8IYB1 491 aaPredicted RBP23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 FGD4Q96M96 766 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 CPVLQ9H3G5 476 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 C11orf49Q9H6J7 331 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 PNMA2Q9UL42 364 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 CNPY2Q9Y2B0 182 aa23.65■■□□□ 1.38
HCFC1R1-202ENST00000354679 SLC27A2O14975 620 aa23.64■■□□□ 1.37
HCFC1R1-202ENST00000354679 CNTN2Q02246 1040 aa23.64■■□□□ 1.37
HCFC1R1-202ENST00000354679 SART3Q15020 963 aaKnown RBP23.64■■□□□ 1.37
HCFC1R1-202ENST00000354679 ANO1Q5XXA6 986 aa23.64■■□□□ 1.37
HCFC1R1-202ENST00000354679 FAM133AQ8N9E0 248 aa23.64■■□□□ 1.37
HCFC1R1-202ENST00000354679 WDR19Q8NEZ3 1342 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 ZNF865P0CJ78 1059 aaPredicted RBP23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 ANTXR2P58335 489 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 WTAPQ15007 396 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 CREB3L3Q68CJ9 461 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 NSMFQ6X4W1 530 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 CHST3Q7LGC8 479 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 CYP39A1Q9NYL5 469 aa23.63■■□□□ 1.37
HCFC1R1-202ENST00000354679 SMCHD1A6NHR9 2005 aa23.62■■□□□ 1.37
HCFC1R1-202ENST00000354679 SNAI1O95863 264 aaPredicted RBP23.62■■□□□ 1.37
HCFC1R1-202ENST00000354679 NECTIN1Q15223 517 aa23.62■■□□□ 1.37
HCFC1R1-202ENST00000354679 ERICH6BQ5W0A0 696 aa23.62■■□□□ 1.37
HCFC1R1-202ENST00000354679 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.62■■□□□ 1.37
HCFC1R1-202ENST00000354679 PPP4R2Q9NY27 417 aa23.62■■□□□ 1.37
HCFC1R1-202ENST00000354679 COL6A1P12109 1028 aa23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 CDC37Q16543 378 aaPredicted RBP23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 TMEM67Q5HYA8 995 aa23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 ARMCX2Q7L311 632 aa23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 ADGRF4Q8IZF3 695 aa23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 SENP2Q9HC62 589 aa23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 ZHX1Q9UKY1 873 aaPredicted RBP23.61■■□□□ 1.37
HCFC1R1-202ENST00000354679 SOWAHBA6NEL2 793 aa23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 NFIBO00712 420 aa23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 DHX16O60231 1041 aaKnown RBP23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 AKR1A1P14550 325 aa23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 CCDC144CPQ8IYA2 1237 aa23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 STAG2Q8N3U4 1231 aa23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 ARRDC4Q8NCT1 418 aa23.6■■□□□ 1.37
HCFC1R1-202ENST00000354679 H0YGN5 161 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms