RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 SEC24CP53992 1094 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 SAFBQ15424 915 aaKnown RBP eCLIP9.48□□□□□ -0.89
TDP1-201ENST00000335725 EMBQ6PCB8 327 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 CLEC4GQ6UXB4 293 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 GDAP1L1Q96MZ0 367 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 PANK4Q9NVE7 773 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TTF2Q9UNY4 1162 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 LUC7L2Q9Y383 392 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 CC2D2AQ9P2K1 1620 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 GRIN2BQ13224 1484 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 WDR7Q9Y4E6 1490 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 POTEFA5A3E0 1075 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 UNCXA6NJT0 531 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 HNRNPRO43390 633 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 CYTH3O43739 400 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 FGFR1OPO95684 399 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 ENDOUP21128 410 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 RFC5P40937 340 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 AK2P54819 239 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 FAM69CQ0P6D2 419 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 CFAP58Q5T655 872 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 ATL3Q6DD88 541 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TOGARAM2Q6ZUX3 1019 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 MAP7D3Q8IWC1 876 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 ABTB1Q969K4 478 aaPredicted RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 LENG1Q96BZ8 264 aaPredicted RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 IFT74Q96LB3 600 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 PANX2Q96RD6 677 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 SIKE1Q9BRV8 207 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 OSBPL3Q9H4L5 887 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 SUGT1Q9Y2Z0 365 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 ARHGEF11O15085 1522 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 KIAA0586Q9BVV6 1533 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 ZBED4O75132 1171 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 PORP16435 677 aaPredicted RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 TUBA4AP68366 448 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TTMPQ5BVD1 217 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TBC1D1Q86TI0 1168 aaPredicted RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 SIRT2Q8IXJ6 389 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TTC30BQ8N4P2 665 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 TMCO5AQ8N6Q1 288 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 GIMAP1Q8WWP7 306 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 USP6NLQ92738 828 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 CASP10Q92851 521 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 IQCDQ96DY2 449 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 IFT43Q96FT9 208 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 LZTFL1Q9NQ48 299 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 PPANQ9NQ55 473 aaKnown RBP9.48□□□□□ -0.89
TDP1-201ENST00000335725 LEMD3Q9Y2U8 911 aa9.48□□□□□ -0.89
TDP1-201ENST00000335725 PDHA1P08559 390 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 NFKBIAP25963 317 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 SERPINB8P50452 374 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 GEMIN4P57678 1058 aaKnown RBP9.47□□□□□ -0.89
TDP1-201ENST00000335725 GPSM2P81274 684 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 LSAMPQ13449 338 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CCSAPQ6IQ19 270 aaPredicted RBP9.47□□□□□ -0.89
TDP1-201ENST00000335725 PDILTQ8N807 584 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 LRRC45Q96CN5 670 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 PGBD1Q96JS3 809 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 SLF1Q9BQI6 1058 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 TIPINQ9BVW5 301 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 SEZ6LQ9BYH1 1024 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 PARVBQ9HBI1 364 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 EMILIN1Q9Y6C2 1016 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 NQO1P15559 274 aaKnown RBP9.47□□□□□ -0.89
TDP1-201ENST00000335725 PRKAR2BP31323 418 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 EPHB4P54760 987 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CAMK2BQ13554 666 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 OR52E8Q6IFG1 317 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 SCAIQ8N9R8 606 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 GABPB2Q8TAK5 448 aaPredicted RBP9.47□□□□□ -0.89
TDP1-201ENST00000335725 SDF4Q9BRK5 362 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 C1orf115Q9H7X2 142 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 FADS3Q9Y5Q0 445 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 LMTK2Q8IWU2 1503 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CEP170Q5SW79 1584 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 SPECC1L-ADORA2AF8WAN1 911 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 FAM160A1Q05DH4 1040 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 MCL1Q07820 350 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 SUZ12Q15022 739 aaKnown RBP9.47□□□□□ -0.89
TDP1-201ENST00000335725 CYP26C1Q6V0L0 522 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CPLX4Q7Z7G2 160 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CCDC197Q8NCU1 140 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 ARL8AQ96BM9 186 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
TDP1-201ENST00000335725 PFDN4Q9NQP4 134 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 KIAA1468Q9P260 1216 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 CDC42BPAQ5VT25 1732 aa9.47□□□□□ -0.89
TDP1-201ENST00000335725 NRXN1Q9ULB1 1477 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 PIK3R4Q99570 1358 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 ACADVLP49748 655 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 PDE6CP51160 858 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 PPIDQ08752 370 aaKnown RBP9.46□□□□□ -0.89
TDP1-201ENST00000335725 PAK2Q13177 524 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 NEPROQ6NW34 567 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 SLC2A7Q6PXP3 512 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 DAAM2Q86T65 1068 aa9.46□□□□□ -0.89
TDP1-201ENST00000335725 NEK1Q96PY6 1258 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms