RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 INPP5BP32019 993 aa8.81□□□□□ -1
VMA21-201ENST00000330374 BCAMP50895 628 aa8.81□□□□□ -1
VMA21-201ENST00000330374 SPAG1Q07617 926 aa8.81□□□□□ -1
VMA21-201ENST00000330374 WDR59Q6PJI9 974 aa8.81□□□□□ -1
VMA21-201ENST00000330374 MMS22LQ6ZRQ5 1243 aa8.81□□□□□ -1
VMA21-201ENST00000330374 SH3RF1Q7Z6J0 888 aa8.81□□□□□ -1
VMA21-201ENST00000330374 DNAJC10Q8IXB1 793 aa8.81□□□□□ -1
VMA21-201ENST00000330374 ELOA2Q8IYF1 753 aaPredicted RBP8.81□□□□□ -1
VMA21-201ENST00000330374 ANKRD13AQ8IZ07 590 aa8.81□□□□□ -1
VMA21-201ENST00000330374 MB21D1Q8N884 522 aa8.81□□□□□ -1
VMA21-201ENST00000330374 GIPC2Q8TF65 315 aa8.81□□□□□ -1
VMA21-201ENST00000330374 RWDD2AQ9UIY3 292 aa8.81□□□□□ -1
VMA21-201ENST00000330374 NDUFAB1O14561 156 aa8.81□□□□□ -1
VMA21-201ENST00000330374 TUBBP07437 444 aa8.81□□□□□ -1
VMA21-201ENST00000330374 CKAP4Q07065 602 aaKnown RBP8.81□□□□□ -1
VMA21-201ENST00000330374 CCDC181Q5TID7 509 aa8.81□□□□□ -1
VMA21-201ENST00000330374 IFT81Q8WYA0 676 aa8.81□□□□□ -1
VMA21-201ENST00000330374 MYO5AQ9Y4I1 1855 aaKnown RBP8.81□□□□□ -1
VMA21-201ENST00000330374 SOS2Q07890 1332 aaPredicted RBP8.81□□□□□ -1
VMA21-201ENST00000330374 ITIH6Q6UXX5 1313 aa8.81□□□□□ -1
VMA21-201ENST00000330374 ESYT3A0FGR9 886 aa8.8□□□□□ -1
VMA21-201ENST00000330374 PSMD14O00487 310 aa8.8□□□□□ -1
VMA21-201ENST00000330374 GNPATO15228 680 aa8.8□□□□□ -1
VMA21-201ENST00000330374 MCM3P25205 808 aa8.8□□□□□ -1
VMA21-201ENST00000330374 AARSP49588 968 aaKnown RBP eCLIP8.8□□□□□ -1
VMA21-201ENST00000330374 ATP2B2Q01814 1243 aa8.8□□□□□ -1
VMA21-201ENST00000330374 TBC1D8BQ0IIM8 1120 aa8.8□□□□□ -1
VMA21-201ENST00000330374 IFIT1BQ5T764 474 aaKnown RBP8.8□□□□□ -1
VMA21-201ENST00000330374 RNF187Q5TA31 235 aaPredicted RBP8.8□□□□□ -1
VMA21-201ENST00000330374 TYW1BQ6NUM6 668 aa8.8□□□□□ -1
VMA21-201ENST00000330374 NFRKBQ6P4R8 1299 aa8.8□□□□□ -1
VMA21-201ENST00000330374 ISCA1Q9BUE6 129 aa8.8□□□□□ -1
VMA21-201ENST00000330374 NHEJ1Q9H9Q4 299 aaPredicted RBP8.8□□□□□ -1
VMA21-201ENST00000330374 MYO1FO00160 1098 aa8.8□□□□□ -1
VMA21-201ENST00000330374 TBC1D12O60347 775 aa8.8□□□□□ -1
VMA21-201ENST00000330374 NMT2O60551 498 aa8.8□□□□□ -1
VMA21-201ENST00000330374 MOCS3O95396 460 aa8.8□□□□□ -1
VMA21-201ENST00000330374 MTIF2P46199 727 aaKnown RBP8.8□□□□□ -1
VMA21-201ENST00000330374 KIF5AQ12840 1032 aa8.8□□□□□ -1
VMA21-201ENST00000330374 ENOX2Q16206 610 aaKnown RBP8.8□□□□□ -1
VMA21-201ENST00000330374 PKN1Q16512 942 aa8.8□□□□□ -1
VMA21-201ENST00000330374 CYLC1P35663 651 aaPredicted RBP8.8□□□□□ -1
VMA21-201ENST00000330374 NUBP1P53384 320 aa8.8□□□□□ -1
VMA21-201ENST00000330374 KRT83P78385 493 aa8.8□□□□□ -1
VMA21-201ENST00000330374 ZBTB38Q8NAP3 1195 aaPredicted RBP8.8□□□□□ -1
VMA21-201ENST00000330374 FERMT2Q96AC1 680 aa8.8□□□□□ -1
VMA21-201ENST00000330374 VIPAS39Q9H9C1 493 aa8.8□□□□□ -1
VMA21-201ENST00000330374 ZC3H4Q9UPT8 1303 aaKnown RBP8.8□□□□□ -1
VMA21-201ENST00000330374 KRT14P02533 472 aa8.8□□□□□ -1
VMA21-201ENST00000330374 CYP7A1P22680 504 aa8.8□□□□□ -1
VMA21-201ENST00000330374 EVX2Q03828 476 aa8.8□□□□□ -1
VMA21-201ENST00000330374 IRF2BP1Q8IU81 584 aa8.8□□□□□ -1
VMA21-201ENST00000330374 SECISBP2LQ93073 1101 aaKnown RBP8.8□□□□□ -1
VMA21-201ENST00000330374 NKRFO15226 690 aaKnown RBP eCLIP8.79□□□□□ -1
VMA21-201ENST00000330374 PCCAP05165 728 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 GUCY2FP51841 1108 aa8.79□□□□□ -1
VMA21-201ENST00000330374 SF3A3Q12874 501 aaKnown RBP eCLIP8.79□□□□□ -1
VMA21-201ENST00000330374 TRIM14Q14142 442 aa8.79□□□□□ -1
VMA21-201ENST00000330374 IL17AQ16552 155 aa8.79□□□□□ -1
VMA21-201ENST00000330374 CCDC178Q5BJE1 867 aa8.79□□□□□ -1
VMA21-201ENST00000330374 ZNF658Q5TYW1 1059 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 MCTP2Q6DN12 878 aa8.79□□□□□ -1
VMA21-201ENST00000330374 CATIPQ7Z7H3 387 aa8.79□□□□□ -1
VMA21-201ENST00000330374 TSEN2Q8NCE0 465 aaKnown RBP8.79□□□□□ -1
VMA21-201ENST00000330374 ZCRB1Q8TBF4 217 aaKnown RBP8.79□□□□□ -1
VMA21-201ENST00000330374 HPS3Q969F9 1004 aa8.79□□□□□ -1
VMA21-201ENST00000330374 CCDC42Q96M95 316 aa8.79□□□□□ -1
VMA21-201ENST00000330374 MYCBPQ99417 103 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 FAM207AQ9NSI2 230 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 MYH10P35580 1976 aa8.79□□□□□ -1
VMA21-201ENST00000330374 HNRNPH1P31943 449 aaKnown RBP8.79□□□□□ -1
VMA21-201ENST00000330374 CTSWP56202 376 aa8.79□□□□□ -1
VMA21-201ENST00000330374 APBA1Q02410 837 aa8.79□□□□□ -1
VMA21-201ENST00000330374 SPA17Q15506 151 aa8.79□□□□□ -1
VMA21-201ENST00000330374 PTPROQ16827 1216 aa8.79□□□□□ -1
VMA21-201ENST00000330374 CSGALNACT2Q8N6G5 542 aa8.79□□□□□ -1
VMA21-201ENST00000330374 ENAHQ8N8S7 591 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 GPKOWQ92917 476 aaPredicted RBP eCLIP8.79□□□□□ -1
VMA21-201ENST00000330374 CAPN6Q9Y6Q1 641 aa8.79□□□□□ -1
VMA21-201ENST00000330374 MST1RQ04912 1400 aa8.79□□□□□ -1
VMA21-201ENST00000330374 RIC1Q4ADV7 1423 aa8.79□□□□□ -1
VMA21-201ENST00000330374 BUB1O43683 1085 aa8.79□□□□□ -1
VMA21-201ENST00000330374 KIAA0754O94854 1291 aa8.79□□□□□ -1
VMA21-201ENST00000330374 PPFIA1Q13136 1202 aa8.79□□□□□ -1
VMA21-201ENST00000330374 FAM47AQ5JRC9 791 aa8.79□□□□□ -1
VMA21-201ENST00000330374 TICAM2Q86XR7 235 aa8.79□□□□□ -1
VMA21-201ENST00000330374 PHF20Q9BVI0 1012 aa8.79□□□□□ -1
VMA21-201ENST00000330374 FAM184BQ9ULE4 1060 aa8.79□□□□□ -1
VMA21-201ENST00000330374 SIPA1L3O60292 1781 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 ZSCAN5CA6NGD5 496 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 PDXDC2PQ6P474 469 aa8.79□□□□□ -1
VMA21-201ENST00000330374 C2CD5Q86YS7 1000 aa8.79□□□□□ -1
VMA21-201ENST00000330374 ESR2Q92731 530 aa8.79□□□□□ -1
VMA21-201ENST00000330374 MS4A14Q96JA4 679 aa8.79□□□□□ -1
VMA21-201ENST00000330374 NCAPGQ9BPX3 1015 aa8.79□□□□□ -1
VMA21-201ENST00000330374 TUBGCP2Q9BSJ2 902 aa8.79□□□□□ -1
VMA21-201ENST00000330374 RNF26Q9BY78 433 aaPredicted RBP8.79□□□□□ -1
VMA21-201ENST00000330374 ASAP1Q9ULH1 1129 aa8.79□□□□□ -1
VMA21-201ENST00000330374 LGALS16A8MUM7 142 aa8.78□□□□□ -1
VMA21-201ENST00000330374 HSF2BPO75031 334 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms