RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PDGFDQ9GZP0 370 aaPredicted RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 UQCRHLA0A096LP55 91 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 DDTLA6NHG4 134 aaPredicted RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 C21orf2O43822 256 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 UQCRHP07919 91 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 TPM2P07951 284 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 CCZ1BP86790 482 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 CCZ1P86791 482 aaPredicted RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 NONOQ15233 471 aaKnown RBP eCLIP8.58□□□□□ -1.04
IFT88-201ENST00000319980 JAKMIP3Q5VZ66 844 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 KRT25Q7Z3Z0 450 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 MTRQ99707 1265 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 SAMSN1Q9NSI8 373 aaKnown RBP8.58□□□□□ -1.04
IFT88-201ENST00000319980 PLIN4Q96Q06 1357 aa8.58□□□□□ -1.04
IFT88-201ENST00000319980 CBFA2T2O43439 604 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 SNHG28P0DPA3 235 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 SFPQP23246 707 aaKnown RBP eCLIP8.57□□□□□ -1.04
IFT88-201ENST00000319980 SLC16A2P36021 539 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 UBA7P41226 1012 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 STX17P56962 302 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 CCDC96Q2M329 555 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 TTBK2Q6IQ55 1244 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 ARMCX5Q6P1M9 558 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 PDXDC2PQ6P474 469 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 KCTD1Q719H9 257 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 REXO1Q8N1G1 1221 aaKnown RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 TBCKQ8TEA7 893 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 C7orf43Q8WVR3 580 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 PLIN2Q99541 437 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 PYM1Q9BRP8 204 aaKnown RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 DNAJC18Q9H819 358 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 PI4KBQ9UBF8 816 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 NRXN2Q9P2S2 1712 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 TMEM232C9JQI7 657 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 CD44P16070 742 aaKnown RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 ERCC5P28715 1186 aaPredicted RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 STAT6P42226 847 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 ZNF543Q08ER8 600 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 CUL4BQ13620 913 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 TPD52L1Q16890 204 aaPredicted RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 SHROOM1Q2M3G4 852 aaPredicted RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 FAM177A1Q8N128 213 aaPredicted RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 MRIQ9BWK5 157 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 DHX36Q9H2U1 1008 aaKnown RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 TMEM260Q9NX78 707 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 FAM198AQ9UFP1 575 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 PPIP5K2O43314 1243 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 CERKLQ49MI3 558 aaPredicted RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 NEK8Q86SG6 692 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 ADGRF4Q8IZF3 695 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 CCDC17Q96LX7 622 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 TRIM34Q9BYJ4 488 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 EHD4Q9H223 541 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 TDRD3Q9H7E2 651 aaKnown RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 JMJD4Q9H9V9 463 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 DISC1Q9NRI5 854 aa8.57□□□□□ -1.04
IFT88-201ENST00000319980 TRMT1Q9NXH9 659 aaKnown RBP8.57□□□□□ -1.04
IFT88-201ENST00000319980 MYO3BQ8WXR4 1341 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 USP27XA6NNY8 438 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 LAD1O00515 517 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 MYO1BO43795 1136 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 ZNF18P17022 549 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 HDLBPQ00341 1268 aaKnown RBP8.56□□□□□ -1.04
IFT88-201ENST00000319980 RRAGBQ5VZM2 374 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 SH3BP5LQ7L8J4 393 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 IDI2Q9BXS1 227 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 SERPINA10Q9UK55 444 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 COBLO75128 1261 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 FKBP1AP62942 108 aaKnown RBP8.56□□□□□ -1.04
IFT88-201ENST00000319980 GPATCH4Q5T3I0 446 aaKnown RBP8.56□□□□□ -1.04
IFT88-201ENST00000319980 CCDC150Q8NCX0 1101 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 PRIMPOLQ96LW4 560 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 INTS13Q9NVM9 706 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 MYH1P12882 1939 aa8.56□□□□□ -1.04
IFT88-201ENST00000319980 COL11A2P13942 1736 aaPredicted RBP8.56□□□□□ -1.04
IFT88-201ENST00000319980 BRCA1P38398 1863 aaKnown RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 CDK5RAP2Q96SN8 1893 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 PNMA6FA0A0J9YX94 578 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 ESYT2A0FGR8 921 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 YDJCA8MPS7 323 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 PPP1R3GB7ZBB8 358 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 GTPBP6O43824 516 aaPredicted RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 OR52Z1P0C646 297 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 EEF2P13639 858 aaKnown RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 TNNT1P13805 278 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 TECP42680 631 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 NAALADL2Q58DX5 795 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 VSTM4Q8IW00 320 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 PRMT6Q96LA8 375 aaPredicted RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 MAPK8IP1Q9UQF2 711 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 USP17L10C9JJH3 530 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 hCG_1984214I3L0E3 225 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 PPP1R11O60927 126 aaPredicted RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 PRPHP41219 470 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 SLC1A4P43007 532 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 ADCY7P51828 1080 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 SPATA1Q5VX52 437 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 ZNF713Q8N859 430 aaPredicted RBP8.55□□□□□ -1.04
IFT88-201ENST00000319980 KANSL2Q9H9L4 492 aa8.55□□□□□ -1.04
IFT88-201ENST00000319980 SYNRGQ9UMZ2 1314 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms