RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 NT5DC1Q5TFE4 455 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 TATDN1Q6P1N9 297 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 HOMER1Q86YM7 354 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 CCDC125Q86Z20 511 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 ERO1AQ96HE7 468 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 PPP1R13BQ96KQ4 1090 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 DACH1Q9UI36 760 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 PCDHA5Q9Y5H7 936 aa20.71■□□□□ 0.91
SHISA3-201ENST00000319234 GREB1LQ9C091 1923 aaPredicted RBP20.71■□□□□ 0.91
SHISA3-201ENST00000319234 hCG_1984214I3L0E3 225 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 SERPINC1P01008 464 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 ZNF543Q08ER8 600 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 KANK3Q6NY19 840 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 ZNF713Q8N859 430 aaPredicted RBP20.7■□□□□ 0.9
SHISA3-201ENST00000319234 TRIML1Q8N9V2 468 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 RASGRP4Q8TDF6 673 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 GMLQ99445 158 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 C6orf50Q9HD87 102 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 SIPA1L1O43166 1804 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 KIF13BQ9NQT8 1826 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 ATRNL1Q5VV63 1379 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 PSME4Q14997 1843 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 PSMD14O00487 310 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 ATP1A3P13637 1013 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 GNA11P29992 359 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 MCM7P33993 719 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 ISM2Q6H9L7 571 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 USP49Q70CQ1 688 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 PIM2Q9P1W9 311 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 SERTAD1Q9UHV2 236 aa20.7■□□□□ 0.9
SHISA3-201ENST00000319234 COL2A1P02458 1487 aaPredicted RBP20.69■□□□□ 0.9
SHISA3-201ENST00000319234 SMCO2A6NFE2 343 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 RAD17O75943 681 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 VSTM4Q8IW00 320 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 MLKLQ8NB16 471 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 MKL1Q969V6 931 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 GPCPD1Q9NPB8 672 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 HDAC9Q9UKV0 1011 aa20.69■□□□□ 0.9
SHISA3-201ENST00000319234 ESYT2A0FGR8 921 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 FAM196BA6NMK8 535 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 ATP2B2Q01814 1243 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 POSTNQ15063 836 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 GPATCH4Q5T3I0 446 aaKnown RBP20.68■□□□□ 0.9
SHISA3-201ENST00000319234 ARL6IP4Q66PJ3 421 aaKnown RBP20.68■□□□□ 0.9
SHISA3-201ENST00000319234 FCHSD1Q86WN1 690 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 C4orf32Q8N8J7 132 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 KANSL2Q9H9L4 492 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 NYAP2Q9P242 653 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 ACTN4O43707 911 aaKnown RBP20.68■□□□□ 0.9
SHISA3-201ENST00000319234 ZBTB7AO95365 584 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 SLU7O95391 586 aaKnown RBP20.68■□□□□ 0.9
SHISA3-201ENST00000319234 KRT25Q7Z3Z0 450 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 SYMPKQ92797 1274 aaKnown RBP20.68■□□□□ 0.9
SHISA3-201ENST00000319234 EPSTI1Q96J88 318 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 TMX1Q9H3N1 280 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 L2HGDHQ9H9P8 463 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 TMOD2Q9NZR1 351 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 ZNRF3Q9ULT6 936 aa20.68■□□□□ 0.9
SHISA3-201ENST00000319234 VWA3AA6NCI4 1184 aa20.67■□□□□ 0.9
SHISA3-201ENST00000319234 SPDYE2BA6NHP3 402 aa20.67■□□□□ 0.9
SHISA3-201ENST00000319234 SPDYE6P0CI01 402 aa20.67■□□□□ 0.9
SHISA3-201ENST00000319234 NIM1KQ8IY84 436 aa20.67■□□□□ 0.9
SHISA3-201ENST00000319234 PDILTQ8N807 584 aa20.67■□□□□ 0.9
SHISA3-201ENST00000319234 CCDC34Q96HJ3 373 aa20.67■□□□□ 0.9
SHISA3-201ENST00000319234 SARSP49591 514 aaKnown RBP20.66■□□□□ 0.9
SHISA3-201ENST00000319234 CT47A1Q5JQC4 288 aaPredicted RBP20.66■□□□□ 0.9
SHISA3-201ENST00000319234 TMEM179Q6ZVK1 233 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 MAN1B1Q9UKM7 699 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 ZNF215Q9UL58 517 aaPredicted RBP20.66■□□□□ 0.9
SHISA3-201ENST00000319234 COL4A5P29400 1685 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 FOXN1O15353 648 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 EEF2P13639 858 aaKnown RBP20.66■□□□□ 0.9
SHISA3-201ENST00000319234 POLD1P28340 1107 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 DLGAP5Q15398 846 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 INF2Q27J81 1249 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 OGFOD1Q8N543 542 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 ENOX1Q8TC92 643 aaKnown RBP20.66■□□□□ 0.9
SHISA3-201ENST00000319234 SMARCE1Q969G3 411 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 JMJD4Q9H9V9 463 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 FANCLQ9NW38 375 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 OGFRQ9NZT2 677 aa20.66■□□□□ 0.9
SHISA3-201ENST00000319234 IL17AQ16552 155 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 CCDC96Q2M329 555 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 ADGRF4Q8IZF3 695 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 ZNF397Q8NF99 534 aaPredicted RBP20.65■□□□□ 0.9
SHISA3-201ENST00000319234 DPF2Q92785 391 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 ATF5Q9Y2D1 282 aaPredicted RBP20.65■□□□□ 0.9
SHISA3-201ENST00000319234 A0A087X0B3 334 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 PNMA6FA0A0J9YX94 578 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 SOCS7O14512 581 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 BMP6P22004 513 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 LONP1P36776 959 aaKnown RBP20.65■□□□□ 0.9
SHISA3-201ENST00000319234 MORC3Q14149 939 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 NONOQ15233 471 aaKnown RBP eCLIP20.65■□□□□ 0.9
SHISA3-201ENST00000319234 ABCB5Q2M3G0 1257 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 DALRD3Q5D0E6 543 aaKnown RBP20.65■□□□□ 0.9
SHISA3-201ENST00000319234 TTBK2Q6IQ55 1244 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 AGBL3Q8NEM8 1001 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 DCAF4Q8WV16 495 aa20.65■□□□□ 0.9
SHISA3-201ENST00000319234 DHX58Q96C10 678 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms