RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 STIM1Q13586 685 aa21.41■■□□□ 1.02
RTN4-201ENST00000317610 JAKMIP2Q96AA8 810 aa21.41■■□□□ 1.02
RTN4-201ENST00000317610 CCSER1Q9C0I3 900 aa21.41■■□□□ 1.02
RTN4-201ENST00000317610 FAM204AQ9H8W3 233 aa21.41■■□□□ 1.02
RTN4-201ENST00000317610 PCDHA4Q9UN74 947 aa21.41■■□□□ 1.02
RTN4-201ENST00000317610 EIF3CLB5ME19 914 aaKnown RBP21.4■■□□□ 1.02
RTN4-201ENST00000317610 CYLC1P35663 651 aaPredicted RBP21.4■■□□□ 1.02
RTN4-201ENST00000317610 CCDC170Q8IYT3 715 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 EIF3CQ99613 913 aaKnown RBP21.4■■□□□ 1.02
RTN4-201ENST00000317610 MAGEC2Q9UBF1 373 aaPredicted RBP21.4■■□□□ 1.02
RTN4-201ENST00000317610 DOT1LQ8TEK3 1739 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 RASSF10A6NK89 507 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 TRIM66O15016 1216 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 RNF40O75150 1001 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 KIF5BP33176 963 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 LRRC31Q6UY01 552 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 DTHD1Q6ZMT9 781 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 COG1Q8WTW3 980 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 DHTKD1Q96HY7 919 aaPredicted RBP21.4■■□□□ 1.02
RTN4-201ENST00000317610 TRIM47Q96LD4 638 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 EXOC1Q9NV70 894 aa21.4■■□□□ 1.02
RTN4-201ENST00000317610 EVX2Q03828 476 aa21.39■■□□□ 1.02
RTN4-201ENST00000317610 RCSD1Q6JBY9 416 aa21.39■■□□□ 1.02
RTN4-201ENST00000317610 TRIM34Q9BYJ4 488 aa21.39■■□□□ 1.02
RTN4-201ENST00000317610 DCP1AQ9NPI6 582 aaPredicted RBP21.39■■□□□ 1.02
RTN4-201ENST00000317610 TFR2Q9UP52 801 aa21.39■■□□□ 1.02
RTN4-201ENST00000317610 MYH1P12882 1939 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 SRGAP2O75044 1071 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 PHACTR2O75167 634 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 CDK17Q00537 523 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 SBK1Q52WX2 424 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 FAM47AQ5JRC9 791 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 KIAA1328Q86T90 577 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 NSUN4Q96CB9 384 aaKnown RBP21.39■■□□□ 1.01
RTN4-201ENST00000317610 DUSP9Q99956 384 aaKnown RBP21.39■■□□□ 1.01
RTN4-201ENST00000317610 BTG4Q9NY30 223 aa21.39■■□□□ 1.01
RTN4-201ENST00000317610 NIP7Q9Y221 180 aaKnown RBP eCLIP21.39■■□□□ 1.01
RTN4-201ENST00000317610 ZBED6P86452 979 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 CAVIN4Q5BKX8 364 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 FOXR1Q6PIV2 292 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 C10orf67Q8IYJ2 551 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 LACRTQ9GZZ8 138 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 RCCD1A6NED2 376 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 B4DLN1 442 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 DAGLBQ8NCG7 672 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 AFAP1L1Q8TED9 768 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 FAM84BQ96KN1 310 aaPredicted RBP21.38■■□□□ 1.01
RTN4-201ENST00000317610 TUBGCP2Q9BSJ2 902 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 NHEJ1Q9H9Q4 299 aaPredicted RBP21.38■■□□□ 1.01
RTN4-201ENST00000317610 MAGEF1Q9HAY2 307 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 ATP8A2Q9NTI2 1148 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 AGPAT5Q9NUQ2 364 aa21.38■■□□□ 1.01
RTN4-201ENST00000317610 CRKLP46109 303 aaKnown RBP21.37■■□□□ 1.01
RTN4-201ENST00000317610 FIGNQ5HY92 759 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 ZBTB9Q96C00 473 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 TMEM60Q9H2L4 133 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 CUEDC2Q9H467 287 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 ZNHIT6Q9NWK9 470 aaKnown RBP21.37■■□□□ 1.01
RTN4-201ENST00000317610 ARPP21Q9UBL0 812 aaPredicted RBP21.37■■□□□ 1.01
RTN4-201ENST00000317610 WNK3Q9BYP7 1800 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 MAST2Q6P0Q8 1798 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 A0A1W2PQJ5 194 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 WTIPA6NIX2 430 aaPredicted RBP21.37■■□□□ 1.01
RTN4-201ENST00000317610 LAD1O00515 517 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 ANKRD18AQ8IVF6 992 aa21.37■■□□□ 1.01
RTN4-201ENST00000317610 CRNKL1Q9BZJ0 848 aaKnown RBP21.37■■□□□ 1.01
RTN4-201ENST00000317610 CASZ1Q86V15 1759 aa21.36■■□□□ 1.01
RTN4-201ENST00000317610 PP2D1A8MPX8 630 aa21.36■■□□□ 1.01
RTN4-201ENST00000317610 PRPHP41219 470 aa21.36■■□□□ 1.01
RTN4-201ENST00000317610 TNNT3P45378 269 aaPredicted RBP21.36■■□□□ 1.01
RTN4-201ENST00000317610 CCNI2Q6ZMN8 369 aaPredicted RBP21.36■■□□□ 1.01
RTN4-201ENST00000317610 GOLGA6L1Q8N7Z2 621 aa21.36■■□□□ 1.01
RTN4-201ENST00000317610 BSDC1Q9NW68 430 aaPredicted RBP21.36■■□□□ 1.01
RTN4-201ENST00000317610 RNF216Q9NWF9 866 aaPredicted RBP21.36■■□□□ 1.01
RTN4-201ENST00000317610 PES1O00541 588 aaKnown RBP21.35■■□□□ 1.01
RTN4-201ENST00000317610 CCNE1P24864 410 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 UBA7P41226 1012 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 GALNT17Q6IS24 598 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 ZSCAN29Q8IWY8 852 aaPredicted RBP21.35■■□□□ 1.01
RTN4-201ENST00000317610 CSGALNACT2Q8N6G5 542 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 LRRC15Q8TF66 581 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 P2RX5Q93086 422 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 CAPZA3Q96KX2 299 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 PCDHA6Q9UN73 950 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 PCDHA8Q9Y5H6 950 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 PDE2AO00408 941 aaPredicted RBP21.35■■□□□ 1.01
RTN4-201ENST00000317610 EXOC5O00471 708 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 ADAMTS2O95450 1211 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 TRIM21P19474 475 aaKnown RBP21.35■■□□□ 1.01
RTN4-201ENST00000317610 NT5C2P49902 561 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 TYW1BQ6NUM6 668 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 ZNF572Q7Z3I7 529 aaPredicted RBP21.35■■□□□ 1.01
RTN4-201ENST00000317610 FBXO33Q7Z6M2 555 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 FNBP4Q8N3X1 1017 aaPredicted RBP21.35■■□□□ 1.01
RTN4-201ENST00000317610 RASGRP4Q8TDF6 673 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 ANKS1AQ92625 1134 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 GPKOWQ92917 476 aaPredicted RBP eCLIP21.35■■□□□ 1.01
RTN4-201ENST00000317610 ERGIC2Q96RQ1 377 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 TSGA10Q9BZW7 698 aa21.35■■□□□ 1.01
RTN4-201ENST00000317610 MYH14Q7Z406 1995 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms