RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 RUBCNQ92622 972 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 MMTAG2Q9BU76 263 aaKnown RBP6.15□□□□□ -1.43
VPS50-202ENST00000305866 GDF3Q9NR23 364 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 CEP131Q9UPN4 1083 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 FER1L6Q2WGJ9 1857 aa6.15□□□□□ -1.43
VPS50-202ENST00000305866 NDUFA10O95299 355 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 PRPHP41219 470 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 IARSP41252 1262 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 COPB1P53618 953 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 MCCD1P59942 119 aaPredicted RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 PPARAQ07869 468 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 DDR1Q08345 913 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 ITPK1Q13572 414 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 ICE2Q659A1 982 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 HAUS3Q68CZ6 603 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 RALYLQ86SE5 291 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 MREGQ8N565 214 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 CEP112Q8N8E3 955 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 SMARCC1Q92922 1105 aaPredicted RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 FAM204AQ9H8W3 233 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 MYO6Q9UM54 1294 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 COL2A1P02458 1487 aaPredicted RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 A0A1W2PQJ5 194 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 KLRG2A4D1S0 409 aaPredicted RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 SRGAP2O75044 1071 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 COBLO75128 1261 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 RNF40O75150 1001 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 RASSF9O75901 435 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 GGCXP38435 758 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 PRCPP42785 496 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 TEX35Q5T0J7 233 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 LMOD2Q6P5Q4 547 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 TMTC3Q6ZXV5 915 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 CMTR1Q8N1G2 835 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 MB21D1Q8N884 522 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 SEC14L1Q92503 715 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 PUF60Q9UHX1 559 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 DACH1Q9UI36 760 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 TTF2Q9UNY4 1162 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 LGALS16A8MUM7 142 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 NOL4O94818 638 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 PLEKHA8P1O95397 391 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 FKBP4Q02790 459 aaKnown RBP eCLIP6.14□□□□□ -1.43
VPS50-202ENST00000305866 KCNB1Q14721 858 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 TLDC1Q6P9B6 456 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 TEX2Q8IWB9 1127 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 SRBD1Q8N5C6 995 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 GIMAP8Q8ND71 665 aaPredicted RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 CERKQ8TCT0 537 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 FAM163AQ96GL9 167 aaPredicted RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 EPB41L4BQ9H329 900 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 MAGEF1Q9HAY2 307 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 LZTFL1Q9NQ48 299 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 AGPAT5Q9NUQ2 364 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 VPS54Q9P1Q0 977 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 DMGDHQ9UI17 866 aaKnown RBP6.14□□□□□ -1.43
VPS50-202ENST00000305866 CAPN6Q9Y6Q1 641 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 ABCB11O95342 1321 aa6.14□□□□□ -1.43
VPS50-202ENST00000305866 ZNF233A6NK53 670 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 LAD1O00515 517 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 SERPINC1P01008 464 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 CRKLP46109 303 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 TRDNQ13061 729 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 WLSQ5T9L3 541 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 ZNF658Q5TYW1 1059 aaPredicted RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 CPLX2Q6PUV4 134 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 CCDC12Q8WUD4 166 aaPredicted RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 ZSCAN10Q96SZ4 725 aaPredicted RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 ATP8A2Q9NTI2 1148 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 ARHGAP20Q9P2F6 1191 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 C21orf2O43822 256 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 TLR2O60603 784 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 RHOBTB3O94955 611 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 FSBPO95073 299 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 CHRNDQ07001 517 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 ZCWPW2Q504Y3 356 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 TMEM67Q5HYA8 995 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 ZNF569Q5MCW4 686 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 TMTC1Q8IUR5 882 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 GSPT2Q8IYD1 628 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 ZNF654Q8IZM8 581 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 MARCH10Q8NA82 808 aaPredicted RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 NSUN4Q96CB9 384 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 TRERF1Q96PN7 1200 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 NAPGQ99747 312 aaPredicted RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 VPS18Q9P253 973 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 SMCHD1A6NHR9 2005 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 MYO3BQ8WXR4 1341 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 TRIM49BA6NDI0 452 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 GOLGA8AA7E2F4 631 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 MBD4O95243 580 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 POU5F1Q01860 360 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 PFKFB3Q16875 520 aaPredicted RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 CCDC178Q5BJE1 867 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 TNFAIP8L3Q5GJ75 292 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 CTR9Q6PD62 1173 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 SYNE3Q6ZMZ3 975 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 MFSD6Q6ZSS7 791 aa6.13□□□□□ -1.43
VPS50-202ENST00000305866 YTHDF3Q7Z739 585 aaKnown RBP6.13□□□□□ -1.43
VPS50-202ENST00000305866 DGKHQ86XP1 1220 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms