RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 TSPYL1Q9H0U9 437 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 COL24A1Q17RW2 1714 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 ERLIN1O75477 346 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 PFKFB3Q16875 520 aaPredicted RBP20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 KAT14Q9H8E8 782 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 MKRN1Q9UHC7 482 aaKnown RBP20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 GRAPQ13588 217 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 SPATA1Q5VX52 437 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 LRRC31Q6UY01 552 aa20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 GRAPLQ8TC17 118 aaPredicted RBP20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 NAPGQ99747 312 aaPredicted RBP20.03■□□□□ 0.8
TSPAN17-201ENST00000298564 DLEC1Q9Y238 1755 aa20.02■□□□□ 0.8
TSPAN17-201ENST00000298564 BMP15O95972 392 aa20.02■□□□□ 0.8
TSPAN17-201ENST00000298564 FAM196AQ6ZSG2 479 aa20.02■□□□□ 0.8
TSPAN17-201ENST00000298564 RASGRP2Q7LDG7 609 aa20.02■□□□□ 0.8
TSPAN17-201ENST00000298564 WDR66Q8TBY9 1149 aa20.02■□□□□ 0.8
TSPAN17-201ENST00000298564 MCM7P33993 719 aa20.02■□□□□ 0.79
TSPAN17-201ENST00000298564 PACS2Q86VP3 889 aa20.02■□□□□ 0.79
TSPAN17-201ENST00000298564 RAB21Q9UL25 225 aa20.02■□□□□ 0.79
TSPAN17-201ENST00000298564 UBAP1LF5GYI3 381 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 KIF5BP33176 963 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 ATP2C1P98194 919 aaPredicted RBP20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 STAG2Q8N3U4 1231 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 CNBD1Q8NA66 436 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 MKNK2Q9HBH9 465 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 MTMR7Q9Y216 660 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 LEMD3Q9Y2U8 911 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 TNRC6CQ9HCJ0 1690 aaKnown RBP20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 EIF3JO75822 258 aaKnown RBP20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 ARHGAP25P42331 645 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 USP17L1Q7RTZ2 530 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 MSANTD4Q8NCY6 345 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 PNMA1Q8ND90 353 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 TGFBRAP1Q8WUH2 860 aa20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 GPKOWQ92917 476 aaPredicted RBP eCLIP20.01■□□□□ 0.79
TSPAN17-201ENST00000298564 EIF3CLB5ME19 914 aaKnown RBP20■□□□□ 0.79
TSPAN17-201ENST00000298564 CUL4BQ13620 913 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 KRT31Q15323 416 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 SH3RF1Q7Z6J0 888 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 SLC44A5Q8NCS7 719 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 EIF3CQ99613 913 aaKnown RBP20■□□□□ 0.79
TSPAN17-201ENST00000298564 MYO6Q9UM54 1294 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 PPP1R3GB7ZBB8 358 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 RNF40O75150 1001 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 KRT9P35527 623 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 RRAGBQ5VZM2 374 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 TTC19Q6DKK2 380 aaPredicted RBP20■□□□□ 0.79
TSPAN17-201ENST00000298564 KIAA1551Q9HCM1 1747 aa20■□□□□ 0.79
TSPAN17-201ENST00000298564 CCDC88AQ3V6T2 1871 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 FILIP1LQ4L180 1135 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 DGKHQ86XP1 1220 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 HNRNPLLQ8WVV9 542 aaKnown RBP19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 MMS19Q96T76 1030 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 PSD3Q9NYI0 1048 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 XDHP47989 1333 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 LAMB1P07942 1786 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 NOP2P46087 812 aaKnown RBP19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 IL17AQ16552 155 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 TMED8Q6PL24 325 aaPredicted RBP19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 EHD4Q9H223 541 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 ABHD10Q9NUJ1 306 aa19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 SAP30BPQ9UHR5 308 aaKnown RBP19.99■□□□□ 0.79
TSPAN17-201ENST00000298564 ZNF185O15231 689 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 ERCC5P28715 1186 aaPredicted RBP19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 PBX1P40424 430 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 BAG3O95817 575 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 TSPY3P0CV98 308 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 TSPY8P0CW00 308 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 PPARDQ03181 441 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 MAPKAPK5Q8IW41 473 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 RASGRP4Q8TDF6 673 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 POLD4Q9HCU8 107 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 ATP1A1P05023 1023 aaKnown RBP19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 ZNF804AQ7Z570 1209 aa19.98■□□□□ 0.79
TSPAN17-201ENST00000298564 TRIM49BA6NDI0 452 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 MYBL2P10244 700 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 GPSM2P81274 684 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 BLIDQ8IZY5 108 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 ZNF444Q8N0Y2 327 aaPredicted RBP19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 PLIN2Q99541 437 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 FAM205AQ6ZU69 1335 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 TRAPPC10P48553 1259 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 GSTO1P78417 241 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 CDKAL1Q5VV42 579 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 TYW1BQ6NUM6 668 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 LRRC4BQ9NT99 713 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 STX8Q9UNK0 236 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 REXO2Q9Y3B8 237 aaKnown RBP19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 DUSP10Q9Y6W6 482 aa19.97■□□□□ 0.79
TSPAN17-201ENST00000298564 SYF2O95926 243 aaKnown RBP19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 UBXN1Q04323 297 aa19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 PRR5LQ6MZQ0 368 aa19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 CNGA4Q8IV77 575 aa19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 AMOTL1Q8IY63 956 aa19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 RPGRQ92834 1020 aaKnown RBP19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 GSDMAQ96QA5 445 aa19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 MAD2L2Q9UI95 211 aa19.96■□□□□ 0.79
TSPAN17-201ENST00000298564 GDAQ9Y2T3 454 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms