RNA–Protein interactions for RNA: ENST00000295454.7

GABRB1-201, Transcript of gamma-aminobutyric acid type A receptor beta1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB1, Length 2,143 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB1-201ENST00000295454 FAM177A1Q8N128 213 aaPredicted RBP20.59■□□□□ 0.89
GABRB1-201ENST00000295454 SPATA20Q8TB22 786 aa20.59■□□□□ 0.89
GABRB1-201ENST00000295454 ZNF70Q9UC06 446 aaPredicted RBP20.59■□□□□ 0.89
GABRB1-201ENST00000295454 CNTNAP1P78357 1384 aa20.59■□□□□ 0.89
GABRB1-201ENST00000295454 COL2A1P02458 1487 aaPredicted RBP20.59■□□□□ 0.89
GABRB1-201ENST00000295454 MYH7BA7E2Y1 1941 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 GOLGA6L6A8MZA4 724 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 FMR1Q06787 632 aaKnown RBP eCLIP20.58■□□□□ 0.89
GABRB1-201ENST00000295454 ARID5BQ14865 1188 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 ABCB5Q2M3G0 1257 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 PDXDC2PQ6P474 469 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 REXO1Q8N1G1 1221 aaKnown RBP20.58■□□□□ 0.89
GABRB1-201ENST00000295454 TBCKQ8TEA7 893 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 NUP88Q99567 741 aaPredicted RBP20.58■□□□□ 0.89
GABRB1-201ENST00000295454 MTRQ99707 1265 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 KANSL2Q9H9L4 492 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 NYAP2Q9P242 653 aa20.58■□□□□ 0.89
GABRB1-201ENST00000295454 SHTN1A0MZ66 631 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 IKBKBO14920 756 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 EDIL3O43854 480 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 GH2P01242 217 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 KARSQ15046 597 aaKnown RBP20.57■□□□□ 0.88
GABRB1-201ENST00000295454 UBE2SQ16763 222 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 GRIPAP1Q4V328 841 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 SLFN13Q68D06 897 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 MKL1Q969V6 931 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 MED15Q96RN5 788 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 PNMA6FA0A0J9YX94 578 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 CCNT1O60563 726 aaKnown RBP20.57■□□□□ 0.88
GABRB1-201ENST00000295454 ADCY7P51828 1080 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 MYL5Q02045 173 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 DPYDQ12882 1025 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 GPATCH4Q5T3I0 446 aaKnown RBP20.57■□□□□ 0.88
GABRB1-201ENST00000295454 KANK3Q6NY19 840 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 TMEM179Q6ZVK1 233 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 TRMT44Q8IYL2 757 aaKnown RBP20.57■□□□□ 0.88
GABRB1-201ENST00000295454 XPO4Q9C0E2 1151 aaKnown RBP20.57■□□□□ 0.88
GABRB1-201ENST00000295454 BLZF1Q9H2G9 400 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 IFNKQ9P0W0 207 aa20.57■□□□□ 0.88
GABRB1-201ENST00000295454 SMTNL1A8MU46 457 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 LONP1P36776 959 aaKnown RBP20.56■□□□□ 0.88
GABRB1-201ENST00000295454 DLGAP5Q15398 846 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 NEK8Q86SG6 692 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 NIM1KQ8IY84 436 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 MTMR8Q96EF0 704 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 ZNRF3Q9ULT6 936 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 hCG_1984214I3L0E3 225 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 SLC1A4P43007 532 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 SNAP25P60880 206 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 DTHD1Q6ZMT9 781 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 ZNF713Q8N859 430 aaPredicted RBP20.56■□□□□ 0.88
GABRB1-201ENST00000295454 LRRC15Q8TF66 581 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 PIM2Q9P1W9 311 aa20.56■□□□□ 0.88
GABRB1-201ENST00000295454 SMC2O95347 1197 aa20.55■□□□□ 0.88
GABRB1-201ENST00000295454 CXCL9Q07325 125 aa20.55■□□□□ 0.88
GABRB1-201ENST00000295454 CACTINQ8WUQ7 758 aaKnown RBP20.55■□□□□ 0.88
GABRB1-201ENST00000295454 DPF2Q92785 391 aa20.55■□□□□ 0.88
GABRB1-201ENST00000295454 VEZTQ9HBM0 779 aa20.55■□□□□ 0.88
GABRB1-201ENST00000295454 FANCLQ9NW38 375 aa20.55■□□□□ 0.88
GABRB1-201ENST00000295454 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.55■□□□□ 0.88
GABRB1-201ENST00000295454 SCAF8Q9UPN6 1271 aaKnown RBP20.55■□□□□ 0.88
GABRB1-201ENST00000295454 A0A1W2PRG0 241 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 ZBTB5O15062 677 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 TAL1P17542 331 aaPredicted RBP20.54■□□□□ 0.88
GABRB1-201ENST00000295454 QRICH1Q2TAL8 776 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 SPDYE2Q495Y8 402 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 HSP90AA4PQ58FG1 418 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 POTEDQ86YR6 584 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 SMYD4Q8IYR2 804 aaPredicted RBP20.54■□□□□ 0.88
GABRB1-201ENST00000295454 PLIN2Q99541 437 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 PPP1R1BQ9UD71 204 aaPredicted RBP20.54■□□□□ 0.88
GABRB1-201ENST00000295454 OR52Z1P0C646 297 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 CD44P16070 742 aaKnown RBP20.54■□□□□ 0.88
GABRB1-201ENST00000295454 FANCCQ00597 558 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 IQUBQ8NA54 791 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 DCAF4Q8WV16 495 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 XPO5Q9HAV4 1204 aaKnown RBP eCLIP20.54■□□□□ 0.88
GABRB1-201ENST00000295454 TMOD2Q9NZR1 351 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 HDAC9Q9UKV0 1011 aa20.54■□□□□ 0.88
GABRB1-201ENST00000295454 F5H6K3 240 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 TDP2O95551 362 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 NDUFB10O96000 172 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 TPM3P06753 285 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 KLRC3Q07444 240 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 CUL4BQ13620 913 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 NAALADL2Q58DX5 795 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 RBM26Q5T8P6 1007 aaKnown RBP20.53■□□□□ 0.88
GABRB1-201ENST00000295454 TMEM39BQ9GZU3 492 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 RIC8AQ9NPQ8 531 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 SMCHD1A6NHR9 2005 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 SLC37A4O43826 429 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 NEMFO60524 1076 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 OFD1O75665 1012 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 PTPN21Q16825 1174 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 PPP4R3BQ5MIZ7 849 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 FILIP1Q7Z7B0 1213 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 OGFOD1Q8N543 542 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 TRIML1Q8N9V2 468 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 KIAA1524Q8TCG1 905 aa20.53■□□□□ 0.88
GABRB1-201ENST00000295454 FAM151AQ8WW52 585 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms