RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ADGRG1Q9Y653 693 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 MDM2Q00987 491 aaPredicted RBP11.23□□□□□ -0.61
HMGCR-201ENST00000287936 ORC2Q13416 577 aaPredicted RBP11.23□□□□□ -0.61
HMGCR-201ENST00000287936 ADGRA1Q86SQ6 560 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 FOXP4Q8IVH2 680 aaPredicted RBP11.23□□□□□ -0.61
HMGCR-201ENST00000287936 REXO1L1PQ8IX06 675 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 ZC3H12CQ9C0D7 883 aaKnown RBP11.23□□□□□ -0.61
HMGCR-201ENST00000287936 KCNQ2O43526 872 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 TADA3O75528 432 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 PKN1Q16512 942 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 CCDC84Q86UT8 332 aaPredicted RBP11.23□□□□□ -0.61
HMGCR-201ENST00000287936 SLC35F6Q8N357 371 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 LINC00116Q8NCU8 138 aa11.23□□□□□ -0.61
HMGCR-201ENST00000287936 GOLGA8HP0CJ92 632 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 SH3RF3Q8TEJ3 882 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-201ENST00000287936 CUL5Q93034 780 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 P2RX5Q93086 422 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 CCNE1P24864 410 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 KCNB1Q14721 858 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 SNX29Q8TEQ0 813 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 MYO6Q9UM54 1294 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.22□□□□□ -0.61
HMGCR-201ENST00000287936 MRFAP1Q9Y605 127 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 CCDC151A5D8V7 595 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 PPP1R12BO60237 982 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-201ENST00000287936 PNMA6AP0CW24 399 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-201ENST00000287936 ASPRV1Q53RT3 343 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 CCDC65Q8IXS2 484 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 TUBGCP2Q9BSJ2 902 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 GPCPD1Q9NPB8 672 aa11.22□□□□□ -0.61
HMGCR-201ENST00000287936 BIN2Q9UBW5 565 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-201ENST00000287936 F8W031 263 aaPredicted RBP11.21□□□□□ -0.61
HMGCR-201ENST00000287936 OAS2P29728 719 aaKnown RBP11.21□□□□□ -0.61
HMGCR-201ENST00000287936 PRPHP41219 470 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 TECP42680 631 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 TMEM47Q9BQJ4 181 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 ABHD10Q9NUJ1 306 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 BARHL2Q9NY43 387 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 STK17AQ9UEE5 414 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 LMAN1P49257 510 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 KCNQ4P56696 695 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 SMC1AQ14683 1233 aaKnown RBP11.21□□□□□ -0.61
HMGCR-201ENST00000287936 DIXDC1Q155Q3 683 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 VPS36Q86VN1 386 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 MB21D1Q8N884 522 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
HMGCR-201ENST00000287936 LGALS16A8MUM7 142 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 CDC25AP30304 524 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 TRAF1Q13077 416 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 TBX2Q13207 712 aaPredicted RBP11.21□□□□□ -0.62
HMGCR-201ENST00000287936 ACRBPQ8NEB7 543 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 SECISBP2LQ93073 1101 aaKnown RBP11.21□□□□□ -0.62
HMGCR-201ENST00000287936 CCSER1Q9C0I3 900 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 NUP188Q5SRE5 1749 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 PPP1R3GB7ZBB8 358 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 COBLO75128 1261 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 PRCPP42785 496 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 CDK8P49336 464 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 CNOT6LQ96LI5 555 aaKnown RBP11.21□□□□□ -0.62
HMGCR-201ENST00000287936 CCDC43Q96MW1 224 aaKnown RBP11.21□□□□□ -0.62
HMGCR-201ENST00000287936 SAR1BQ9Y6B6 198 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 PARP3Q9Y6F1 533 aa11.21□□□□□ -0.62
HMGCR-201ENST00000287936 MAP3K9P80192 1104 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 PARD6BQ9BYG5 372 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 PLCG1P19174 1290 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 CAPZA3Q96KX2 299 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 WDR24Q96S15 920 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 NT5C3AQ9H0P0 336 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 TMOD2Q9NZR1 351 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 KDM3AQ9Y4C1 1321 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 DISP2A7MBM2 1401 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 LRP6O75581 1613 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 A0A1W2PQC6 194 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 UBAP1LF5GYI3 381 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 BBOX1O75936 387 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 NDUFA10O95299 355 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 NUCKS1Q9H1E3 243 aaKnown RBP11.2□□□□□ -0.62
HMGCR-201ENST00000287936 RNF216Q9NWF9 866 aaPredicted RBP11.2□□□□□ -0.62
HMGCR-201ENST00000287936 TCEAL9Q9UHQ7 104 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 COL14A1Q05707 1796 aaKnown RBP11.2□□□□□ -0.62
HMGCR-201ENST00000287936 TJP1Q07157 1748 aa11.2□□□□□ -0.62
HMGCR-201ENST00000287936 DAGLBQ8NCG7 672 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 SPZ1Q9BXG8 430 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 USP21Q9UK80 565 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 PCDHA6Q9UN73 950 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 PCDHA8Q9Y5H6 950 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 B4DLN1 442 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 IFI16Q16666 785 aaKnown RBP11.19□□□□□ -0.62
HMGCR-201ENST00000287936 CDKAL1Q5VV42 579 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 RASGRP2Q7LDG7 609 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 CCDC170Q8IYT3 715 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 TBCKQ8TEA7 893 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 TSPYL1Q9H0U9 437 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 EHMT1Q9H9B1 1298 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 STK24Q9Y6E0 443 aa11.19□□□□□ -0.62
HMGCR-201ENST00000287936 MACROD2A1Z1Q3 448 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms