RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 ZNF444Q8N0Y2 327 aaPredicted RBP28.27■■■□□ 2.12
ROM1-201ENST00000278833 DYNLL2Q96FJ2 89 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 FAM163AQ96GL9 167 aaPredicted RBP28.27■■■□□ 2.12
ROM1-201ENST00000278833 AK8Q96MA6 479 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 ANKIB1Q9P2G1 1089 aa28.27■■■□□ 2.12
ROM1-201ENST00000278833 GPR75-ASB3A0A0A6YYF3 556 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 CYTH3O43739 400 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 GYPCP04921 128 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 IL1R1P14778 569 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 PLCG2P16885 1265 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 COPB1P53618 953 aaKnown RBP28.26■■■□□ 2.11
ROM1-201ENST00000278833 TUBB2AQ13885 445 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 CCDC12Q8WUD4 166 aaPredicted RBP28.26■■■□□ 2.11
ROM1-201ENST00000278833 GPKOWQ92917 476 aaPredicted RBP eCLIP28.26■■■□□ 2.11
ROM1-201ENST00000278833 WDR24Q96S15 920 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 TMEM47Q9BQJ4 181 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 TUBB2BQ9BVA1 445 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 ZMYND12Q9H0C1 365 aa28.26■■■□□ 2.11
ROM1-201ENST00000278833 ARGLU1Q9NWB6 273 aaPredicted RBP28.26■■■□□ 2.11
ROM1-201ENST00000278833 PLIN4Q96Q06 1357 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 H7C1D1 291 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 CRY2Q49AN0 593 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 ARHGAP29Q52LW3 1261 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 NAALADL2Q58DX5 795 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 NELFBQ8WX92 580 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 BLZF1Q9H2G9 400 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 PPP1R1BQ9UD71 204 aaPredicted RBP28.25■■■□□ 2.11
ROM1-201ENST00000278833 ATP2B4P23634 1241 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 TCP11X2Q5H9J9 407 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 RAD9BQ6WBX8 426 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 ADSSL1Q8N142 457 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 CNBD1Q8NA66 436 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 NEDD1Q8NHV4 660 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 KBTBD4Q9NVX7 518 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 ZNF446Q9NWS9 450 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 PRDM4Q9UKN5 801 aa28.25■■■□□ 2.11
ROM1-201ENST00000278833 FAM193AP78312 1265 aa28.24■■■□□ 2.11
ROM1-201ENST00000278833 KRT25Q7Z3Z0 450 aa28.24■■■□□ 2.11
ROM1-201ENST00000278833 TMTC1Q8IUR5 882 aa28.24■■■□□ 2.11
ROM1-201ENST00000278833 MRPL44Q9H9J2 332 aaKnown RBP28.24■■■□□ 2.11
ROM1-201ENST00000278833 SOWAHDA6NJG2 315 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 ATP8B1O43520 1251 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 CLCN6P51797 869 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 BMS1Q14692 1282 aaKnown RBP28.23■■■□□ 2.11
ROM1-201ENST00000278833 CARD6Q9BX69 1037 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 TTF2Q9UNY4 1162 aaKnown RBP28.23■■■□□ 2.11
ROM1-201ENST00000278833 GAKO14976 1311 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 USP17L3A6NCW0 530 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 USP17L4A6NCW7 530 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 RHOBTB3O94955 611 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 RSRC2Q7L4I2 434 aaKnown RBP28.23■■■□□ 2.11
ROM1-201ENST00000278833 USP17L1Q7RTZ2 530 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 NOC3LQ8WTT2 800 aaKnown RBP28.23■■■□□ 2.11
ROM1-201ENST00000278833 TGFBRAP1Q8WUH2 860 aa28.23■■■□□ 2.11
ROM1-201ENST00000278833 ESYT2A0FGR8 921 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 KCNJ18B7U540 433 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 hCG_1984214I3L0E3 225 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 KCNJ12Q14500 433 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 DIXDC1Q155Q3 683 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 CCDC24Q8N4L8 307 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 ZNF713Q8N859 430 aaPredicted RBP28.22■■■□□ 2.11
ROM1-201ENST00000278833 STAMQ92783 540 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 JAG2Q9Y219 1238 aa28.22■■■□□ 2.11
ROM1-201ENST00000278833 A0A1W2PQC6 194 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 KLRC4O43908 158 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 ZRANB2O95218 330 aaKnown RBP eCLIP28.21■■■□□ 2.11
ROM1-201ENST00000278833 EEF1GP26641 437 aaKnown RBP28.21■■■□□ 2.11
ROM1-201ENST00000278833 PPP1R2P41236 205 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 KARSQ15046 597 aaKnown RBP28.21■■■□□ 2.11
ROM1-201ENST00000278833 GRIK5Q16478 980 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 PRR5LQ6MZQ0 368 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 TMEM60Q9H2L4 133 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 THAP9Q9H5L6 903 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 CD209Q9NNX6 404 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 NRXN2Q9P2S2 1712 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 FLT1P17948 1338 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 N4BP3O15049 544 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 CASP14P31944 242 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 PRCPP42785 496 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 MTF1Q14872 753 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 SLF2Q8IX21 1173 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 GPR161Q8N6U8 529 aaKnown RBP28.21■■■□□ 2.11
ROM1-201ENST00000278833 DESI2Q9BSY9 194 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 PODXL2Q9NZ53 605 aa28.21■■■□□ 2.11
ROM1-201ENST00000278833 BTDP43251 543 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 FXR1P51114 621 aaKnown RBP eCLIP28.2■■■□□ 2.1
ROM1-201ENST00000278833 PPP2R3AQ06190 1150 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 COBLL1Q53SF7 1204 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 CREBRFQ8IUR6 639 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 RASGRP4Q8TDF6 673 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 PRDM10Q9NQV6 1147 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 ABHD10Q9NUJ1 306 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 MYO1AQ9UBC5 1043 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 MYH8P13535 1937 aa28.2■■■□□ 2.1
ROM1-201ENST00000278833 NPHP1O15259 732 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 CDK8P49336 464 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 HEATR3Q7Z4Q2 680 aa28.19■■■□□ 2.1
ROM1-201ENST00000278833 GIMAP8Q8ND71 665 aaPredicted RBP28.19■■■□□ 2.1
ROM1-201ENST00000278833 FHDC1Q9C0D6 1143 aaPredicted RBP28.19■■■□□ 2.1
ROM1-201ENST00000278833 KLRF2D3W0D1 207 aa28.19■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms