RNA–Protein interactions for RNA: ENST00000248444.9

VIL1-201, Transcript of villin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIL1, Length 6,531 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-201ENST00000248444 SH3RF3Q8TEJ3 882 aaPredicted RBP11.08□□□□□ -0.64
VIL1-201ENST00000248444 LSM14BQ9BX40 385 aaKnown RBP11.08□□□□□ -0.64
VIL1-201ENST00000248444 ZSWIM6Q9HCJ5 1215 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 RABGAP1Q9Y3P9 1069 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 PDIA3P30101 505 aaKnown RBP11.08□□□□□ -0.64
VIL1-201ENST00000248444 ARMCX5Q6P1M9 558 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 USP17L2Q6R6M4 530 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 ZNF589Q86UQ0 364 aaPredicted RBP11.08□□□□□ -0.64
VIL1-201ENST00000248444 COA7Q96BR5 231 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 PPP1R16BQ96T49 567 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 TDRD3Q9H7E2 651 aaKnown RBP11.08□□□□□ -0.64
VIL1-201ENST00000248444 TMEM191BP0C7N4 346 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 IPO4Q8TEX9 1081 aaKnown RBP11.08□□□□□ -0.64
VIL1-201ENST00000248444 ZBTB9Q96C00 473 aa11.08□□□□□ -0.64
VIL1-201ENST00000248444 GNA14O95837 355 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 CDK8P49336 464 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 KLHL30Q0D2K2 578 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SYT10Q6XYQ8 523 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 STMN4Q9H169 189 aaPredicted RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 PCDHA4Q9UN74 947 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SOS2Q07890 1332 aaPredicted RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 CLTCL1P53675 1640 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 MXRA7P84157 204 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SMIM5Q71RC9 77 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 ATP6V0A1Q93050 837 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 KIAA1024Q9UPX6 916 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 NFE2L3Q9Y4A8 694 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 CAPN9O14815 690 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 RHOXF2BP0C7M4 288 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 RHOXF2Q9BQY4 288 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 STIM2Q9P246 746 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 MINPP1Q9UNW1 487 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SPATA31A6Q5VVP1 1343 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 GADD45BO75293 160 aaPredicted RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 LONRF3Q496Y0 759 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 WRNIP1Q96S55 665 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 PPANQ9NQ55 473 aaKnown RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 FAM207AQ9NSI2 230 aaPredicted RBP11.07□□□□□ -0.64
VIL1-201ENST00000248444 CDC42BPAQ5VT25 1732 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 MYO3BQ8WXR4 1341 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 H7C1W4 665 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SH3BP5O60239 455 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 PFKFB1P16118 471 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 CHRNA5P30532 468 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SCRN1Q12765 414 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 NLRP7Q8WX94 980 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 SSH2Q76I76 1423 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 ADGRB3O60242 1522 aa11.07□□□□□ -0.64
VIL1-201ENST00000248444 TLDC2A0PJX2 215 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 MYL3P08590 195 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 FOXP4Q8IVH2 680 aaPredicted RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 POMGNT1Q8WZA1 660 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 MRRFQ96E11 262 aaKnown RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 NLRC4Q9NPP4 1024 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 COL4A3BPQ9Y5P4 624 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 GH2P01242 217 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 RNASELQ05823 741 aaKnown RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 CCDC26Q8TAB7 109 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 CCDC127Q96BQ5 260 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 NAP1L3Q99457 506 aaPredicted RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 ZHX2Q9Y6X8 837 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 TLR3O15455 904 aaKnown RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 ZSCAN20P17040 1043 aaPredicted RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 GPSM2P81274 684 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 PTGDRQ13258 359 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 CELF1Q92879 486 aaKnown RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 CEP63Q96MT8 703 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 LSG1Q9H089 658 aaKnown RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 NUB1Q9Y5A7 615 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 ATP2C2O75185 946 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 MCM6Q14566 821 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 VPS72Q15906 364 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 OSBP2Q969R2 916 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 SLC39A2Q9NP94 309 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 LARSQ9P2J5 1176 aaKnown RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 INO80B-WBP1J3KQ70 363 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 CDC37Q16543 378 aaPredicted RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 GOLGA5Q8TBA6 731 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 SLC7A3Q8WY07 619 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 CLIC6Q96NY7 704 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 INO80BQ9C086 356 aaPredicted RBP11.06□□□□□ -0.64
VIL1-201ENST00000248444 HAUS2Q9NVX0 235 aa11.06□□□□□ -0.64
VIL1-201ENST00000248444 CPSF1Q10570 1443 aaKnown RBP11.05□□□□□ -0.64
VIL1-201ENST00000248444 SCYL2Q6P3W7 929 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 ZNF365Q70YC5 407 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 RRAGAQ7L523 313 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 FAM160B2Q86V87 743 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 KCNK9Q9NPC2 374 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 C1orf112Q9NSG2 853 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 ZNF215Q9UL58 517 aaPredicted RBP11.05□□□□□ -0.64
VIL1-201ENST00000248444 UBN2Q6ZU65 1347 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 GLI2P10070 1586 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 A0A0G2JLW4 131 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 PIK3CAP42336 1068 aa11.05□□□□□ -0.64
VIL1-201ENST00000248444 UBLCP1Q8WVY7 318 aaPredicted RBP11.05□□□□□ -0.64
VIL1-201ENST00000248444 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.05□□□□□ -0.641e-6■□□□□ 8.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms