RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 KIF1BPQ96EK5 621 aa16.52■□□□□ 0.23
DDX39A-201ENST00000242776 NECAB3Q96P71 396 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-201ENST00000242776 UHRF1Q96T88 793 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-201ENST00000242776 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.23
DDX39A-201ENST00000242776 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.52■□□□□ 0.236e-8■■■□□ 16.2
DDX39A-201ENST00000242776 CXXC1Q9P0U4 656 aaPredicted RBP16.52■□□□□ 0.23
DDX39A-201ENST00000242776 GREB1LQ9C091 1923 aaPredicted RBP16.51■□□□□ 0.23
DDX39A-201ENST00000242776 ELP1O95163 1332 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 UMODL1Q5DID0 1318 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 TLR3O15455 904 aaKnown RBP16.51■□□□□ 0.23
DDX39A-201ENST00000242776 NDUFB10O96000 172 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 RABGGTBP53611 331 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 CCL23P55773 120 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 FAM126BQ8IXS8 530 aa16.51■□□□□ 0.23
DDX39A-201ENST00000242776 ATXN2LQ8WWM7 1075 aaKnown RBP16.51■□□□□ 0.23
DDX39A-201ENST00000242776 YBX2Q9Y2T7 364 aaKnown RBP16.51■□□□□ 0.23
DDX39A-201ENST00000242776 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-201ENST00000242776 MINDY4BA8MYZ0 360 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 F5H6K3 240 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 ZBED4O75132 1171 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 MRPS5P82675 430 aaKnown RBP16.5■□□□□ 0.23
DDX39A-201ENST00000242776 KLRC3Q07444 240 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 PSRC1Q6PGN9 363 aaPredicted RBP16.5■□□□□ 0.23
DDX39A-201ENST00000242776 MAMDC4Q6UXC1 1216 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 ARMCX2Q7L311 632 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 MSL3Q8N5Y2 521 aaKnown RBP16.5■□□□□ 0.23
DDX39A-201ENST00000242776 PUS7LQ9H0K6 701 aaKnown RBP16.5■□□□□ 0.23
DDX39A-201ENST00000242776 MKNK2Q9HBH9 465 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 CLIP2Q9UDT6 1046 aa16.5■□□□□ 0.23
DDX39A-201ENST00000242776 DDX49Q9Y6V7 483 aaKnown RBP16.5■□□□□ 0.23
DDX39A-201ENST00000242776 CST5P28325 142 aaPredicted RBP16.49■□□□□ 0.23
DDX39A-201ENST00000242776 GJA9P57773 515 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 AKNAD1Q5T1N1 836 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 RASIP1Q5U651 963 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 CXCL17Q6UXB2 119 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 CCDC144CPQ8IYA2 1237 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 FGD4Q96M96 766 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 CRBNQ96SW2 442 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 SLC28A3Q9HAS3 691 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 IL23AQ9NPF7 189 aa16.49■□□□□ 0.23
DDX39A-201ENST00000242776 FGBP02675 491 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 MYOGP15173 224 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 RASA1P20936 1047 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 IRX6P78412 446 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-201ENST00000242776 CNTN2Q02246 1040 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 RAB30Q15771 203 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 LRRC47Q8N1G4 583 aaKnown RBP16.48■□□□□ 0.23
DDX39A-201ENST00000242776 PRPF38AQ8NAV1 312 aaKnown RBP16.48■□□□□ 0.23
DDX39A-201ENST00000242776 UPF3AQ9H1J1 476 aaKnown RBP16.48■□□□□ 0.23
DDX39A-201ENST00000242776 ABHD16BQ9H3Z7 469 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 CHD9Q3L8U1 2897 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 PRDM1O75626 825 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 AAMPQ13685 434 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 SKIV2LQ15477 1246 aaKnown RBP16.48■□□□□ 0.23
DDX39A-201ENST00000242776 HAUS7Q99871 368 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 HIPK3Q9H422 1215 aa16.48■□□□□ 0.23
DDX39A-201ENST00000242776 ARPP21Q9UBL0 812 aaPredicted RBP16.48■□□□□ 0.23
DDX39A-201ENST00000242776 REV3LO60673 3130 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 ZBBXA8MT70 800 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 CTAGE5O15320 804 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 ATP5JP18859 108 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 PSMC6P62333 389 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 TNFAIP2Q03169 654 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 TFF2Q03403 129 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 EEPD1Q7L9B9 569 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 ZNF467Q7Z7K2 595 aaPredicted RBP16.47■□□□□ 0.23
DDX39A-201ENST00000242776 HERVK_113Q902F9 699 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 TRPV6Q9H1D0 765 aa16.47■□□□□ 0.23
DDX39A-201ENST00000242776 ASTN1O14525 1302 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 SMARCA5O60264 1052 aaPredicted RBP16.46■□□□□ 0.23
DDX39A-201ENST00000242776 CD4P01730 458 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 UBE3CQ15386 1083 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 PPP2R2DQ66LE6 453 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 SIRT2Q8IXJ6 389 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 SCLYQ96I15 445 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 MTIF3Q9H2K0 278 aaKnown RBP16.46■□□□□ 0.23
DDX39A-201ENST00000242776 CERS4Q9HA82 394 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 NYAP2Q9P242 653 aa16.46■□□□□ 0.23
DDX39A-201ENST00000242776 SCN5AQ14524 2016 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 RFXAPO00287 272 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 DYNC1LI2O43237 492 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-201ENST00000242776 SNAP25P60880 206 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 IKQ13123 557 aaPredicted RBP16.45■□□□□ 0.22
DDX39A-201ENST00000242776 ITGA7Q13683 1181 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 TLK2Q86UE8 772 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 KATNBL1Q9H079 304 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 SLC38A10Q9HBR0 1119 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 NCOR1O75376 2440 aa16.45■□□□□ 0.22
DDX39A-201ENST00000242776 CHD7Q9P2D1 2997 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 HMMRO75330 724 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 KCNQ1P51787 676 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 TMEM63BQ5T3F8 832 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 ZSCAN25Q6NSZ9 544 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 ZNF444Q8N0Y2 327 aaPredicted RBP16.44■□□□□ 0.22
DDX39A-201ENST00000242776 CHST13Q8NET6 341 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 EXOC6Q8TAG9 804 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 FAM122AQ96E09 287 aa16.44■□□□□ 0.22
DDX39A-201ENST00000242776 CEP95Q96GE4 821 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms