RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 CCDC92Q53HC0 331 aaPredicted RBP8.98□□□□□ -0.97
APOB-201ENST00000233242 URB2Q14146 1524 aaKnown RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 A0A1W2PP64 1363 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 CHGBP05060 677 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 DCAF5Q96JK2 942 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 NLRC4Q9NPP4 1024 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 ORC6Q9Y5N6 252 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TARSL2A2RTX5 802 aaKnown RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 OTUD7BQ6GQQ9 843 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 NLRP3Q96P20 1036 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TMOD4Q9NZQ9 345 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TRMT1LQ7Z2T5 733 aaKnown RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 CXorf38Q8TB03 319 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 CCDC124Q96CT7 223 aaKnown RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 PCDHB13Q9Y5F0 798 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 CDKL2Q92772 493 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TUBGCP2Q9BSJ2 902 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 CARD14Q9BXL6 1004 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 PLXNC1O60486 1568 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 IRS4O14654 1257 aaPredicted RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 IFNB1P01574 187 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 ZNF449Q6P9G9 518 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 BLZF1Q9H2G9 400 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 MIGA1Q8NAN2 632 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 PCDHA5Q9Y5H7 936 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 APLFQ8IW19 511 aaPredicted RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 FMO2Q99518 471 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TMEM60Q9H2L4 133 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 EXOC5O00471 708 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 RAPGEF3O95398 923 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TXKP42681 527 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 IRX5P78411 483 aaPredicted RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.97□□□□□ -0.972e-8■■□□□ 13.7
APOB-201ENST00000233242 AKNAD1Q5T1N1 836 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 DIS3Q9Y2L1 958 aaKnown RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 TTI1O43156 1089 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 GARSP41250 739 aaKnown RBP8.97□□□□□ -0.97
APOB-201ENST00000233242 RWDD2AQ9UIY3 292 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 CCDC188H7C350 402 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 TMED1Q13445 227 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 SLC17A8Q8NDX2 589 aa8.97□□□□□ -0.97
APOB-201ENST00000233242 GCNT3O95395 438 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 PDZD4Q76G19 769 aaPredicted RBP8.96□□□□□ -0.97
APOB-201ENST00000233242 ARHGEF25Q86VW2 580 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 PEG3Q9GZU2 1588 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 DPCR1Q3MIW9 517 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 HELBQ8NG08 1087 aaPredicted RBP8.96□□□□□ -0.97
APOB-201ENST00000233242 LSG1Q9H089 658 aaKnown RBP8.96□□□□□ -0.97
APOB-201ENST00000233242 PLB1Q6P1J6 1458 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 IPO5O00410 1097 aaKnown RBP8.96□□□□□ -0.97
APOB-201ENST00000233242 P4HA1P13674 534 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 CYP2C19P33261 490 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 ECEL1O95672 775 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.96□□□□□ -0.97
APOB-201ENST00000233242 SPDL1Q96EA4 605 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 STAMBPL1Q96FJ0 436 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 FAM81BQ96LP2 452 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 EDC4Q6P2E9 1401 aaKnown RBP8.96□□□□□ -0.97
APOB-201ENST00000233242 RASSF10A6NK89 507 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 INHBAP08476 426 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 THAP9Q9H5L6 903 aa8.96□□□□□ -0.97
APOB-201ENST00000233242 DDAH1O94760 285 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 KRT80Q6KB66 452 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 MAGOHBQ96A72 148 aaKnown RBP8.96□□□□□ -0.98
APOB-201ENST00000233242 FAM96AQ9H5X1 160 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 SATB2Q9UPW6 733 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 TRPC6Q9Y210 931 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 KDM5AP29375 1690 aaKnown RBP8.96□□□□□ -0.98
APOB-201ENST00000233242 PNMA6EA0A0J9YXQ4 647 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 APOEP02649 317 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 JARID2Q92833 1246 aaPredicted RBP8.96□□□□□ -0.98
APOB-201ENST00000233242 MAP4K1Q92918 833 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 DBNDD2Q9BQY9 259 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 DPH5Q9H2P9 285 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 AK8Q96MA6 479 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 VIPAS39Q9H9C1 493 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 BUB1O43683 1085 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 SPAG7O75391 227 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 OR52Z1P0C646 297 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 KIF11P52732 1056 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 C11orf57Q6ZUT1 292 aaPredicted RBP8.96□□□□□ -0.98
APOB-201ENST00000233242 PARP9Q8IXQ6 854 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 MYCT1Q8N699 235 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 PDZD8Q8NEN9 1154 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 STK17AQ9UEE5 414 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 PALD1Q9ULE6 856 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 TADA3O75528 432 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 HADHQ16836 314 aaKnown RBP8.96□□□□□ -0.98
APOB-201ENST00000233242 AOC3Q16853 763 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 TTC19Q6DKK2 380 aaPredicted RBP8.96□□□□□ -0.98
APOB-201ENST00000233242 KIFC3Q9BVG8 833 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 ZMYND12Q9H0C1 365 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 NDUFA10O95299 355 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 SLFN14P0C7P3 912 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 KMT5BQ4FZB7 885 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 CNPY4Q8N129 248 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 XAGE2Q96GT9 111 aa8.96□□□□□ -0.98
APOB-201ENST00000233242 MAN1A2O60476 641 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 PCYT1AP49585 367 aa8.95□□□□□ -0.98
APOB-201ENST00000233242 DZIP3Q86Y13 1208 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms