RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 NAV1Q8NEY1 1877 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 ROBO3Q96MS0 1386 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 WDHD1O75717 1129 aaPredicted RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 F13A1P00488 732 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 FGRP09769 529 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 CDK8P49336 464 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 CACNB3P54284 484 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 SSRP1Q08945 709 aaKnown RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 NR1H3Q13133 447 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 IRF5Q13568 498 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 GNL2Q13823 731 aaKnown RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 PPP1R26Q5T8A7 1209 aaPredicted RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 ARHGAP27Q6ZUM4 889 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 C16orf86Q6ZW13 317 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 ENAHQ8N8S7 591 aaPredicted RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 SLC44A5Q8NCS7 719 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 AGBL3Q8NEM8 1001 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 CTCFLQ8NI51 663 aaPredicted RBP11.32□□□□□ -0.6
TTC1-201ENST00000231238 SENP2Q9HC62 589 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 SWAP70Q9UH65 585 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 ZDHHC9Q9Y397 364 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 GJA3Q9Y6H8 435 aa11.32□□□□□ -0.6
TTC1-201ENST00000231238 LAMB1P07942 1786 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 NFKBIEO00221 500 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 MPHOSPH10O00566 681 aaKnown RBP11.31□□□□□ -0.6
TTC1-201ENST00000231238 ADD1P35611 737 aaKnown RBP11.31□□□□□ -0.6
TTC1-201ENST00000231238 RASSF7Q02833 373 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 PPP2R5BQ15173 497 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 FERMT3Q86UX7 667 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 SMARCC2Q8TAQ2 1214 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 WASF1Q92558 559 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 C8orf76Q96K31 380 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 DHX36Q9H2U1 1008 aaKnown RBP11.31□□□□□ -0.6
TTC1-201ENST00000231238 TDRD3Q9H7E2 651 aaKnown RBP11.31□□□□□ -0.6
TTC1-201ENST00000231238 VEZTQ9HBM0 779 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 RBM28Q9NW13 759 aaKnown RBP11.31□□□□□ -0.6
TTC1-201ENST00000231238 SERPINB13Q9UIV8 391 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 STX8Q9UNK0 236 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 MTMR6Q9Y217 621 aa11.31□□□□□ -0.6
TTC1-201ENST00000231238 NMT2O60551 498 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 DDAH1O94760 285 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 KIF5BP33176 963 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 RCAN1P53805 252 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 CXCL9Q07325 125 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 NFIAQ12857 509 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 SKOR2Q2VWA4 1001 aaPredicted RBP11.3□□□□□ -0.6
TTC1-201ENST00000231238 CDC37L1Q7L3B6 337 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 FANCBQ8NB91 859 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 SLC26A6Q9BXS9 759 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 FHDC1Q9C0D6 1143 aaPredicted RBP11.3□□□□□ -0.6
TTC1-201ENST00000231238 GDPD2Q9HCC8 539 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 DDX4Q9NQI0 724 aaKnown RBP11.3□□□□□ -0.6
TTC1-201ENST00000231238 MTMR7Q9Y216 660 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 LTBP3Q9NS15 1303 aa11.3□□□□□ -0.6
TTC1-201ENST00000231238 CLRN2A0PK11 232 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 ESPNB1AK53 854 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 CTDNEP1O95476 244 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 SNRPBP14678 240 aaKnown RBP11.29□□□□□ -0.6
TTC1-201ENST00000231238 RASA1P20936 1047 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 GUCY1B3Q02153 619 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 SEC23AQ15436 765 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 NBPF20Q3BBV1 942 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 CCDC82Q8N4S0 544 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 PHKBQ93100 1093 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 ALG1Q9BT22 464 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 IDI2Q9BXS1 227 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 PI4KBQ9UBF8 816 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 PCDHB9Q9Y5E1 797 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 PCDHAC2Q9Y5I4 1007 aa11.29□□□□□ -0.6
TTC1-201ENST00000231238 SCN9AQ15858 1988 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 TCP10L2B9ZVM9 353 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 ENTPD3O75355 529 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 PRPF40AO75400 957 aaKnown RBP11.28□□□□□ -0.6
TTC1-201ENST00000231238 XBP1P17861 261 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 RPS12P25398 132 aaKnown RBP11.28□□□□□ -0.6
TTC1-201ENST00000231238 CDC27P30260 824 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 ATP2B2Q01814 1243 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 MRPL14Q6P1L8 145 aaKnown RBP11.28□□□□□ -0.6
TTC1-201ENST00000231238 CLEC17AQ6ZS10 378 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 PRMT6Q96LA8 375 aaPredicted RBP11.28□□□□□ -0.6
TTC1-201ENST00000231238 TRIM47Q96LD4 638 aa11.28□□□□□ -0.6
TTC1-201ENST00000231238 ZSCAN16Q9H4T2 348 aaPredicted RBP11.28□□□□□ -0.6
TTC1-201ENST00000231238 ISY1Q9ULR0 285 aaKnown RBP11.28□□□□□ -0.6
TTC1-201ENST00000231238 TRAK2O60296 914 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 IFNAR1P17181 557 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 TNNI2P48788 182 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 GNAQP50148 359 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 KRT85P78386 507 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 SAFBQ15424 915 aaKnown RBP eCLIP11.27□□□□□ -0.6
TTC1-201ENST00000231238 NEDD1Q8NHV4 660 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 ZFP42Q96MM3 310 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 TCP11L1Q9NUJ3 509 aa11.27□□□□□ -0.6
TTC1-201ENST00000231238 ZNF70Q9UC06 446 aaPredicted RBP11.27□□□□□ -0.6
TTC1-201ENST00000231238 DDX49Q9Y6V7 483 aaKnown RBP11.27□□□□□ -0.6
TTC1-201ENST00000231238 MYH1P12882 1939 aa11.27□□□□□ -0.61
TTC1-201ENST00000231238 FIBPO43427 364 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 MMP14P50281 582 aa11.26□□□□□ -0.61
TTC1-201ENST00000231238 RAB15P59190 212 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms