RNA–Protein interactions for RNA: ENST00000230419.8

PTK7-202, Transcript of protein tyrosine kinase 7 (inactive), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTK7, Length 4,272 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK7-202ENST00000230419 KIAA0754O94854 1291 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 MMP10P09238 476 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 VEGFAP15692 232 aaPredicted RBP18.65■□□□□ 0.58
PTK7-202ENST00000230419 GPSM2P81274 684 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 NCBP1Q09161 790 aaKnown RBP18.65■□□□□ 0.58
PTK7-202ENST00000230419 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 CDC25BP30305 580 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 ARMCX5Q6P1M9 558 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 MIGA2Q7L4E1 593 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 TEKT1Q969V4 418 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 BICD1Q96G01 975 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 CEP95Q96GE4 821 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 GSDMAQ96QA5 445 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 PSTPIP2Q9H939 334 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 SPATA31A1Q5TZJ5 1347 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 GJC1P36383 396 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 SPTLC3Q9NUV7 552 aa18.65■□□□□ 0.58
PTK7-202ENST00000230419 SMIM23A6NLE4 172 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 BUB1O43683 1085 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 ATP2C2O75185 946 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 TUBB4AP04350 444 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 GRAPQ13588 217 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 UTP14CQ5TAP6 766 aaKnown RBP18.64■□□□□ 0.58
PTK7-202ENST00000230419 CLEC4GQ6UXB4 293 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 TOGARAM2Q6ZUX3 1019 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 TRIML1Q8N9V2 468 aa18.64■□□□□ 0.58
PTK7-202ENST00000230419 GRAPLQ8TC17 118 aaPredicted RBP18.64■□□□□ 0.58
PTK7-202ENST00000230419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.64■□□□□ 0.58
PTK7-202ENST00000230419 SF3A3Q12874 501 aaKnown RBP eCLIP18.64■□□□□ 0.573e-6■■□□□ 13.9
PTK7-202ENST00000230419 PCDHA4Q9UN74 947 aa18.64■□□□□ 0.57
PTK7-202ENST00000230419 POTEMA6NI47 508 aa18.64■□□□□ 0.57
PTK7-202ENST00000230419 H0YIN7 160 aa18.64■□□□□ 0.57
PTK7-202ENST00000230419 FBXO38Q6PIJ6 1188 aa18.64■□□□□ 0.57
PTK7-202ENST00000230419 PCDHA1Q9Y5I3 950 aa18.64■□□□□ 0.57
PTK7-202ENST00000230419 FER1L4A9Z1Z3 1794 aa18.64■□□□□ 0.57
PTK7-202ENST00000230419 HS2ST1Q7LGA3 356 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 SLIT1O75093 1534 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 PSDA5PKW4 1024 aaPredicted RBP18.63■□□□□ 0.57
PTK7-202ENST00000230419 ZEB2O60315 1214 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 STX10O60499 249 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 SGMS1Q86VZ5 419 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 ENOX1Q8TC92 643 aaKnown RBP18.63■□□□□ 0.57
PTK7-202ENST00000230419 TUBGCP2Q9BSJ2 902 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L15C9J2P7 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L13C9JLJ4 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L11C9JVI0 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L18D6R9N7 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L22D6RA61 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L17D6RBQ6 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L19D6RCP7 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L20D6RJB6 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 PLCG1P19174 1290 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 HOXA13P31271 388 aaPredicted RBP18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L24Q0WX57 530 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 CETN1Q12798 172 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 USP17L6PQ6QN14 398 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 SARM1Q6SZW1 724 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 TPH2Q8IWU9 490 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 ENGASEQ8NFI3 743 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 TRIM31Q9BZY9 425 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 EPN1Q9Y6I3 576 aaPredicted RBP18.63■□□□□ 0.57
PTK7-202ENST00000230419 NEFHP12036 1026 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 OAS2P29728 719 aaKnown RBP18.63■□□□□ 0.57
PTK7-202ENST00000230419 GPBP1Q86WP2 473 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 TBC1D22AQ8WUA7 517 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 FUCA2Q9BTY2 467 aa18.63■□□□□ 0.57
PTK7-202ENST00000230419 IFIH1Q9BYX4 1025 aaKnown RBP18.63■□□□□ 0.57
PTK7-202ENST00000230419 ATP2B4P23634 1241 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 EARS2Q5JPH6 523 aaKnown RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 NAA15Q9BXJ9 866 aaKnown RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 PPEF1O14829 653 aaPredicted RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 GCNT3O95395 438 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 NBPF11Q86T75 865 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 SECISBP2LQ93073 1101 aaKnown RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 CALCOCO1Q9P1Z2 691 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 THRAP3Q9Y2W1 955 aaKnown RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 CETN3O15182 167 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 MCM3P25205 808 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 TTLL12Q14166 644 aaPredicted RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 CERKLQ49MI3 558 aaPredicted RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 CNOT6LQ96LI5 555 aaKnown RBP18.62■□□□□ 0.57
PTK7-202ENST00000230419 KIAA1024Q9UPX6 916 aa18.62■□□□□ 0.57
PTK7-202ENST00000230419 KDM4FA0A1W2PPD8 638 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 LLGL1Q15334 1064 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 RNF187Q5TA31 235 aaPredicted RBP18.61■□□□□ 0.57
PTK7-202ENST00000230419 SMCR8Q8TEV9 937 aaPredicted RBP18.61■□□□□ 0.57
PTK7-202ENST00000230419 SERPINB13Q9UIV8 391 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 RFX7Q2KHR2 1363 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 GSTTP1A0A1W2PQM5 241 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 ERCC5P28715 1186 aaPredicted RBP18.61■□□□□ 0.57
PTK7-202ENST00000230419 PABPC4Q13310 644 aaKnown RBP eCLIP18.61■□□□□ 0.57
PTK7-202ENST00000230419 TTBK2Q6IQ55 1244 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 AFF2P51816 1311 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 KRT31Q15323 416 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 KLHL7Q8IXQ5 586 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 LEMD3Q9Y2U8 911 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 PIK3C2AO00443 1686 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
PTK7-202ENST00000230419 HARSP12081 509 aaKnown RBP18.6■□□□□ 0.57
PTK7-202ENST00000230419 MYCLP12524 364 aaPredicted RBP18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms