RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 HOOK2Q96ED9 719 aa20.72■□□□□ 0.91
VIM-201ENST00000224237 NUP88Q99567 741 aaPredicted RBP20.72■□□□□ 0.91
VIM-201ENST00000224237 HPSEQ9Y251 543 aa20.72■□□□□ 0.91
VIM-201ENST00000224237 WNT7AO00755 349 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 ZNF174Q15697 407 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 CKAP2LQ8IYA6 745 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 REXO1Q8N1G1 1221 aaKnown RBP20.71■□□□□ 0.91
VIM-201ENST00000224237 FERMT2Q96AC1 680 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 ZNF202O95125 648 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 SYKP43405 635 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 ADCY7P51828 1080 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 ATP2C1P98194 919 aaPredicted RBP20.71■□□□□ 0.91
VIM-201ENST00000224237 DCAF15Q66K64 600 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 BTNL9Q6UXG8 535 aa20.71■□□□□ 0.91
VIM-201ENST00000224237 TMEM232C9JQI7 657 aa20.7■□□□□ 0.9
VIM-201ENST00000224237 PPP1R11O60927 126 aaPredicted RBP20.7■□□□□ 0.9
VIM-201ENST00000224237 IKQ13123 557 aaPredicted RBP20.7■□□□□ 0.9
VIM-201ENST00000224237 CDC37Q16543 378 aaPredicted RBP20.7■□□□□ 0.9
VIM-201ENST00000224237 QRICH1Q2TAL8 776 aa20.7■□□□□ 0.9
VIM-201ENST00000224237 VCPKMTQ9H867 229 aa20.7■□□□□ 0.9
VIM-201ENST00000224237 FZD1Q9UP38 647 aa20.7■□□□□ 0.9
VIM-201ENST00000224237 PPP2R3BQ9Y5P8 575 aa20.7■□□□□ 0.9
VIM-201ENST00000224237 CTNND1O60716 968 aaKnown RBP20.69■□□□□ 0.9
VIM-201ENST00000224237 PTGDRQ13258 359 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 NONOQ15233 471 aaKnown RBP eCLIP20.69■□□□□ 0.9
VIM-201ENST00000224237 KIAA1755Q5JYT7 1200 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 SYDE2Q5VT97 1194 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 SPICE1Q8N0Z3 855 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 TIGD1Q96MW7 591 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 GLIS2Q9BZE0 524 aaPredicted RBP20.69■□□□□ 0.9
VIM-201ENST00000224237 RIC8AQ9NPQ8 531 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 FAM13BQ9NYF5 915 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 LMOD1P29536 600 aaPredicted RBP20.69■□□□□ 0.9
VIM-201ENST00000224237 MCM7P33993 719 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 STAT2P52630 851 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 INF2Q27J81 1249 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 SDF4Q9BRK5 362 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 GLT8D2Q9H1C3 349 aa20.69■□□□□ 0.9
VIM-201ENST00000224237 POLR2AP24928 1970 aaKnown RBP20.69■□□□□ 0.9
VIM-201ENST00000224237 GRIN1Q05586 938 aa20.68■□□□□ 0.9
VIM-201ENST00000224237 TYRO3Q06418 890 aa20.68■□□□□ 0.9
VIM-201ENST00000224237 SASS6Q6UVJ0 657 aa20.68■□□□□ 0.9
VIM-201ENST00000224237 CUL5Q93034 780 aa20.68■□□□□ 0.9
VIM-201ENST00000224237 KCNH3Q9ULD8 1083 aa20.68■□□□□ 0.9
VIM-201ENST00000224237 MRVI1Q9Y6F6 885 aa20.68■□□□□ 0.9
VIM-201ENST00000224237 ZYXQ15942 572 aaKnown RBP20.67■□□□□ 0.9
VIM-201ENST00000224237 ARL6IP4Q66PJ3 421 aaKnown RBP20.67■□□□□ 0.9
VIM-201ENST00000224237 DLK2Q6UY11 383 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 ZNF341Q9BYN7 854 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 CSRNP2Q9H175 543 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 ADARB2Q9NS39 739 aaKnown RBP20.67■□□□□ 0.9
VIM-201ENST00000224237 INPP5BP32019 993 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 MRPL12P52815 198 aaKnown RBP20.67■□□□□ 0.9
VIM-201ENST00000224237 RNF214Q8ND24 703 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 AMNQ9BXJ7 453 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 PANK2Q9BZ23 570 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 BIN2Q9UBW5 565 aaPredicted RBP20.67■□□□□ 0.9
VIM-201ENST00000224237 PCDHA1Q9Y5I3 950 aa20.67■□□□□ 0.9
VIM-201ENST00000224237 PITPNM2Q9BZ72 1349 aa20.66■□□□□ 0.9
VIM-201ENST00000224237 SSC5DA1L4H1 1573 aa20.66■□□□□ 0.9
VIM-201ENST00000224237 FAM83BQ5T0W9 1011 aa20.66■□□□□ 0.9
VIM-201ENST00000224237 NEK8Q86SG6 692 aa20.66■□□□□ 0.9
VIM-201ENST00000224237 DOCK1Q14185 1865 aa20.66■□□□□ 0.9
VIM-201ENST00000224237 LAD1O00515 517 aa20.65■□□□□ 0.9
VIM-201ENST00000224237 PLA2G6O60733 806 aa20.65■□□□□ 0.9
VIM-201ENST00000224237 ORC2Q13416 577 aaPredicted RBP20.65■□□□□ 0.9
VIM-201ENST00000224237 SPECC1Q5M775 1068 aa20.65■□□□□ 0.9
VIM-201ENST00000224237 JAKMIP3Q5VZ66 844 aa20.65■□□□□ 0.9
VIM-201ENST00000224237 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
VIM-201ENST00000224237 FEZ1Q99689 392 aa20.65■□□□□ 0.9
VIM-201ENST00000224237 PRR12Q9ULL5 1215 aa20.65■□□□□ 0.9
VIM-201ENST00000224237 CLK2P49760 499 aaKnown RBP20.64■□□□□ 0.9
VIM-201ENST00000224237 FBXO11Q86XK2 927 aa20.64■□□□□ 0.9
VIM-201ENST00000224237 TBCKQ8TEA7 893 aa20.64■□□□□ 0.9
VIM-201ENST00000224237 CHURC1Q8WUH1 139 aa20.64■□□□□ 0.9
VIM-201ENST00000224237 PSTPIP2Q9H939 334 aa20.64■□□□□ 0.9
VIM-201ENST00000224237 SNAP25P60880 206 aa20.64■□□□□ 0.89
VIM-201ENST00000224237 FAM160B2Q86V87 743 aa20.64■□□□□ 0.89
VIM-201ENST00000224237 C4orf32Q8N8J7 132 aa20.64■□□□□ 0.89
VIM-201ENST00000224237 TMEM260Q9NX78 707 aa20.64■□□□□ 0.89
VIM-201ENST00000224237 ZNF112Q9UJU3 913 aa20.64■□□□□ 0.89
VIM-201ENST00000224237 VWA3AA6NCI4 1184 aa20.63■□□□□ 0.89
VIM-201ENST00000224237 TRAF1Q13077 416 aa20.63■□□□□ 0.89
VIM-201ENST00000224237 LETM2Q2VYF4 491 aa20.63■□□□□ 0.89
VIM-201ENST00000224237 LPAR1Q92633 364 aa20.63■□□□□ 0.89
VIM-201ENST00000224237 KIAA1683Q9H0B3 1180 aa20.63■□□□□ 0.89
VIM-201ENST00000224237 CCNT1O60563 726 aaKnown RBP20.62■□□□□ 0.89
VIM-201ENST00000224237 CAVIN2O95810 425 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 UVSSAQ2YD98 709 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 DPY19L2Q6NUT2 758 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 ELOA2Q8IYF1 753 aaPredicted RBP20.62■□□□□ 0.89
VIM-201ENST00000224237 SCYL3Q8IZE3 742 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 CNNM3Q8NE01 707 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 KIAA1468Q9P260 1216 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 FEM1BQ9UK73 627 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 ADM5C9JUS6 153 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 SUPT20HL1Q3ZLR7 823 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 KRBA2Q6ZNG9 492 aa20.62■□□□□ 0.89
VIM-201ENST00000224237 ZKSCAN4Q969J2 545 aaPredicted RBP20.62■□□□□ 0.89
VIM-201ENST00000224237 L3MBTL3Q96JM7 780 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms