RNA–Protein interactions for RNA: ENST00000222823.8

NOD1-201, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOD1, Length 4,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-201ENST00000222823 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
NOD1-201ENST00000222823 CDC25BP30305 580 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 STAT1P42224 750 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 ICA1Q05084 483 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 MORC3Q14149 939 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 SEC31BQ9NQW1 1179 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 GPHNQ9NQX3 736 aaPredicted RBP12.73□□□□□ -0.37
NOD1-201ENST00000222823 KCNG1Q9UIX4 513 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 PYCARDQ9ULZ3 195 aa12.73□□□□□ -0.37
NOD1-201ENST00000222823 M0R2C6 588 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 OSBP2Q969R2 916 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 RNF26Q9BY78 433 aaPredicted RBP12.72□□□□□ -0.37
NOD1-201ENST00000222823 FAM204AQ9H8W3 233 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 TSKSQ9UJT2 592 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 MON2Q7Z3U7 1717 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 SEMA3EO15041 775 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 ETF1P62495 437 aaKnown RBP12.72□□□□□ -0.37
NOD1-201ENST00000222823 TAF12Q16514 161 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 PI16Q6UXB8 463 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 FBXO11Q86XK2 927 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 ASIC3Q9UHC3 531 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 OVOS2A0A0G2JMS6 1433 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 SPATA1Q5VX52 437 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 NLRP10Q86W26 655 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 CDAN1Q8IWY9 1227 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 NOD1Q9Y239 953 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 LEMD3Q9Y2U8 911 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 SAR1BQ9Y6B6 198 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 NDC80O14777 642 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 ALAS1P13196 640 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
NOD1-201ENST00000222823 SLFN13Q68D06 897 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 MIER3Q7Z3K6 550 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 SYCE1Q8N0S2 351 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 AFAP1L1Q8TED9 768 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 DESI2Q9BSY9 194 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 TRIM6Q9C030 488 aaPredicted RBP12.72□□□□□ -0.37
NOD1-201ENST00000222823 POLR3EQ9NVU0 708 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 LARSQ9P2J5 1176 aaKnown RBP12.72□□□□□ -0.37
NOD1-201ENST00000222823 PCDHA1Q9Y5I3 950 aa12.72□□□□□ -0.37
NOD1-201ENST00000222823 NDUFAB1O14561 156 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 VIMP08670 466 aaKnown RBP12.71□□□□□ -0.37
NOD1-201ENST00000222823 TNNI1P19237 187 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 ADD2P35612 726 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 SETDB1Q15047 1291 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 UAP1Q16222 522 aaPredicted RBP12.71□□□□□ -0.37
NOD1-201ENST00000222823 GLG1Q92896 1179 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 KCNB2Q92953 911 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 MRPL11Q9Y3B7 192 aaKnown RBP12.71□□□□□ -0.37
NOD1-201ENST00000222823 C3P01024 1663 aa12.71□□□□□ -0.37
NOD1-201ENST00000222823 XDHP47989 1333 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 TESPA1A2RU30 521 aaPredicted RBP12.71□□□□□ -0.38
NOD1-201ENST00000222823 ATP5DP30049 168 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 LONP1P36776 959 aaKnown RBP12.71□□□□□ -0.38
NOD1-201ENST00000222823 PAK2Q13177 524 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 FAM26FQ5R3K3 315 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 RUFY4Q6ZNE9 571 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 OTUD6AQ7L8S5 288 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 SYMPKQ92797 1274 aaKnown RBP12.71□□□□□ -0.38
NOD1-201ENST00000222823 CCDC17Q96LX7 622 aa12.71□□□□□ -0.38
NOD1-201ENST00000222823 FOXP1Q9H334 677 aaPredicted RBP12.71□□□□□ -0.38
NOD1-201ENST00000222823 GOLGA6CA6NDK9 693 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 GOLGA6DP0CG33 693 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 BAG6P46379 1132 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 CYP2J2P51589 502 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 GNPTABQ3T906 1256 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 CEP128Q6ZU80 1094 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 SND1Q7KZF4 910 aaKnown RBP eCLIP12.7□□□□□ -0.38
NOD1-201ENST00000222823 LRRC8AQ8IWT6 810 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 CNKSR1Q969H4 720 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 EEF2KMTQ96G04 330 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 BCL2L12Q9HB09 334 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 GOLGA6AQ9NYA3 693 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 USTQ9Y2C2 406 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 RPGRIP1Q96KN7 1286 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 SLIT1O75093 1534 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 GOLGA6BA6NDN3 693 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 E7EVH7 732 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 FAM178BQ8IXR5 827 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 CCDC105Q8IYK2 499 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 TRIM58Q8NG06 486 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 GSDMAQ96QA5 445 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 TRIM7Q9C029 511 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 AK9Q5TCS8 1911 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 RPN1P04843 607 aaKnown RBP12.7□□□□□ -0.38
NOD1-201ENST00000222823 POLR2MP0CAP2 368 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 ALDH3A1P30838 453 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 TRAPPC10P48553 1259 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 SNX16P57768 344 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 PDIA6Q15084 440 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 FAM196AQ6ZSG2 479 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 SLFN12Q8IYM2 578 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 LINC00301Q8NCQ3 95 aa12.7□□□□□ -0.38
NOD1-201ENST00000222823 LSM14BQ9BX40 385 aaKnown RBP12.7□□□□□ -0.38
NOD1-201ENST00000222823 TCP10L2B9ZVM9 353 aa12.69□□□□□ -0.38
NOD1-201ENST00000222823 KRT19P08727 400 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms