RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Snrpa1P57784 255 aaKnown RBP16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 Hnrnph2P70333 449 aaKnown RBP16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 Clul1Q3ZRW6 464 aa16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 Ccnl1Q52KE7 532 aaKnown RBP16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 QarsQ8BML9 775 aa16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 Triml1Q8BVP1 470 aa16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 MymkQ9D1N4 221 aa16.34■□□□□ 0.21
Vcan-205ENSMUST00000159337 Pfkfb3A7UAK5 555 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ddx23D3Z0M9 819 aaKnown RBP16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Hnrnph3D3Z3N4 346 aaKnown RBP16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 PpardP35396 440 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Slc30a9Q5IRJ6 567 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Mettl25Q6NXH8 597 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Fnbp1Q80TY0 616 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Tmem60Q8K174 133 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Znf131Q8K3J5 619 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Exoc1Q8R3S6 894 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Rab3il1Q8VDV3 383 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Lrrc59Q922Q8 307 aaKnown RBP16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ubxn6Q99PL6 442 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Dock5B2RY04 1868 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Chrna9G3X8Z7 479 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Hnrnph1O35737 449 aaKnown RBP16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Slc9a2Q3ZAS0 814 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Tmtc2Q56A06 836 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 P3h4Q8K2B0 443 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Saal1Q9D2C2 474 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 SetQ9EQU5 289 aaKnown RBP16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 FignQ9ERZ6 759 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Slc5a4aQ9ET37 656 aa16.33■□□□□ 0.2
Vcan-205ENSMUST00000159337 Odf2A3KGV1 830 aaKnown RBP16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Zfpm1O35615 995 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Tcp1P11983 556 aaKnown RBP16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Krt42Q6IFX2 452 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Stn1Q8K2X3 378 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Mmtag2Q99LX5 260 aaKnown RBP16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 4930550L24RikQ99PA7 320 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Lztr1Q9CQ33 837 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Alpk1Q9CXB8 1231 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 NagaQ9QWR8 415 aa16.32■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ccdc33Q3ULW6 985 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Asic3Q6X1Y6 530 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Kdm1aQ6ZQ88 853 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Spag7Q7TNE3 227 aaKnown RBP16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Q8BWG4 1187 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ushbp1Q8R370 680 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 HdlbpQ8VDJ3 1268 aaKnown RBP16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Plagl2Q925T4 496 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 KynuQ9CXF0 464 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Gm28919A0A087WP35 240 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Krt78E9Q0F0 1068 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Zfp781Q0P5U5 243 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Tex11Q14AT2 947 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Mybpc2Q5XKE0 1136 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Atf3Q60765 181 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Phf8Q80TJ7 1023 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ccdc181Q80ZU5 509 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Rnf187Q8BFX1 236 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 F13a1Q8BH61 732 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Rufy1Q8BIJ7 712 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Rassf10Q8BL43 508 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Atp1a1Q8VDN2 1023 aaKnown RBP16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Efhd1Q9D4J1 240 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Gpaa1Q9WTK3 621 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Kank3Q9Z1P7 791 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Rbbp6P97868 1790 aaKnown RBP16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Myh8P13542 1937 aa16.31■□□□□ 0.2
Vcan-205ENSMUST00000159337 Tex13cD3YU32 604 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Fam186bD3Z420 943 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Gm1758F6VZZ1 202 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Abl1P00520 1123 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Sycp1Q62209 993 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Matr3Q8K310 846 aaKnown RBP16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 MlphQ91V27 590 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Aipl1Q924K1 328 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Eps8l2Q99K30 729 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Cmtr1Q9DBC3 837 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Cxcl11Q9JHH5 100 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Znfx1Q8R151 1909 aaKnown RBP16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 GabrdP22933 449 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Fam107bQ3TGF2 131 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ccdc186Q8C9S4 917 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Lrrc42Q8R2U7 421 aa16.3■□□□□ 0.2
Vcan-205ENSMUST00000159337 Prl2c3P04768 224 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 1700013D24RikQ0P521 120 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Trim43aQ3TL54 445 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Lrrc55Q3UY51 311 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Slc9a1Q61165 820 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Cep70Q6IQY5 616 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Gpbp1Q6NXH3 473 aaKnown RBP16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Vcpip1Q8CDG3 1220 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Alg1Q921Q3 482 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Ndufab1Q9CR21 156 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Sh2b2Q9JID9 621 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Txnrd1Q9JMH6 613 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Frmpd4A2AFR3 1320 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Apol7aB2RT54 418 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Vmn2r71L7N2D8 855 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Nr1i2O54915 431 aa16.29■□□□□ 0.2
Vcan-205ENSMUST00000159337 Skap2Q3UND0 358 aa16.29■□□□□ 0.2
Retrieved 100 of 22,080 RNA–protein pairs in 25.7 ms