RNA–Protein interactions for RNA: ENSMUST00000107935.7

Shank1-202, Transcript of SH3 and multiple ankyrin repeat domains protein 1, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Shank1, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1-202ENSMUST00000107935 Apol11aE9PZG0 334 aa16.43■□□□□ 0.22
Shank1-202ENSMUST00000107935 Prpf31Q8CCF0 499 aaKnown RBP16.43■□□□□ 0.22
Shank1-202ENSMUST00000107935 Gm14025A2AP89 1413 aa16.43■□□□□ 0.22
Shank1-202ENSMUST00000107935 Arhgap17Q3UIA2 846 aa16.43■□□□□ 0.22
Shank1-202ENSMUST00000107935 Csgalnact2Q8C1F4 542 aa16.43■□□□□ 0.22
Shank1-202ENSMUST00000107935 Tex9Q9D845 387 aa16.43■□□□□ 0.22
Shank1-202ENSMUST00000107935 Terf1P70371 421 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Adat2Q6P6J0 191 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 HltfQ6PCN7 1003 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Myef2Q8C854 591 aaKnown RBP16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Polr3cQ9D483 533 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Rtn3Q9ES97 964 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Irx5Q9JKQ4 484 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Gm5580A0A0N4SVP8 411 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Cep126Q0VBV7 1103 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 MaeaQ4VC33 396 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Gm14685Q52KH6 695 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Arhgap10Q6Y5D8 786 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 4930519G04RikQ9CPT7 205 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Crnkl1P63154 690 aaKnown RBP16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Mrpl12Q9DB15 201 aaKnown RBP16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 H2-OaQ9QWV1 250 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Duox2A2AQ99 1517 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Syt2P46097 422 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Hddc2Q3SXD3 199 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Jarid2Q62315 1234 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Ppp2r5bQ6PD28 497 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Epn1Q80VP1 575 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Ccdc15Q8C9M2 810 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Creld2Q9CYA0 350 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Cul1Q9WTX6 776 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Shroom2A2ALU4 1481 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Gm10563F6WIE4 79 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 SympkQ80X82 1284 aa16.42■□□□□ 0.22
Shank1-202ENSMUST00000107935 Polr2fP61219 127 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Rasgrf2P70392 1189 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Serpinb3dQ6UKZ0 387 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 L3mbtl3Q8BLB7 883 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Erbb3Q61526 1339 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 WaplQ65Z40 1200 aaKnown RBP16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Ccdc80Q8R2G6 949 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Casp1P29452 402 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 1700013H16RikQ9DAC5 291 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Gm6657A0A1B0GRJ3 277 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 EspnlQ3UYR4 1005 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Nuak1Q641K5 658 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Q9CR55 154 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Pard3Q99NH2 1333 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Mug1P28665 1476 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Xrcc5P27641 732 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Psmc2P46471 433 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Serpinb10Q8K1K6 397 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Q922C1 641 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Txndc9Q9CQ79 226 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Appbp2Q9DAX9 585 aa16.41■□□□□ 0.22
Shank1-202ENSMUST00000107935 Krt9Q6RHW0 743 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Snrnp27Q8K194 155 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Wars2Q9CYK1 360 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 PicalmQ7M6Y3 660 aaKnown RBP16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Tdrd7Q8K1H1 1086 aaKnown RBP16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Tnpo2Q99LG2 887 aaKnown RBP16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Trim5E9PV98 497 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Nrg3O35181 713 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Sept2P42208 361 aaKnown RBP16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Arhgef1Q61210 920 aaKnown RBP16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Zfp418Q8BFS8 652 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Ankk1Q8BZ25 745 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Pls3Q99K51 630 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Pfdn1Q9CWM4 122 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Kif11Q6P9P6 1052 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Epc1Q8C9X6 813 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Cbx6Q9DBY5 414 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Sgk1Q9WVC6 431 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Casq2O09161 415 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Nr1i2O54915 431 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Rtel1Q0VGM9 1203 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Itih3Q61704 889 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Ppp2r5aQ6PD03 486 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Rabgef1Q9JM13 491 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Ap2b1Q9DBG3 937 aa16.4■□□□□ 0.22
Shank1-202ENSMUST00000107935 Grin2bQ01097 1482 aa16.39■□□□□ 0.22
Shank1-202ENSMUST00000107935 Gbp4A4UUI3 631 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Maml3D4QGC2 1135 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Rab20P35295 233 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 DbnlQ62418 436 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 NemfQ8CCP0 1064 aaKnown RBP16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Med10Q9CXU0 135 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Fkbp3Q62446 224 aaKnown RBP16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Crybg3Q80W49 1005 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Pola1P33609 1465 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Caskin1Q6P9K8 1431 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Slc5a4bQ91ZP4 660 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Ino80bQ99PT3 375 aaKnown RBP16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Syf2Q9D198 242 aaKnown RBP16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Spata17Q9D552 379 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Gm1661E9Q963 441 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Rab3ipQ68EF0 428 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Afg3l1Q920A7 789 aaKnown RBP16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Lonrf3Q9D4H7 753 aa16.39■□□□□ 0.21
Shank1-202ENSMUST00000107935 Add3Q9QYB5 706 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 93.3 ms