RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C PDC5P16467 563 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C UBA1P22515 1024 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C APL1P27351 700 aa2.06□□□□□ -2.08
RTT101YJL047C NTH1P32356 751 aa2.06□□□□□ -2.08
RTT101YJL047C SMY1P32364 656 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C KRE6P32486 720 aa2.06□□□□□ -2.08
RTT101YJL047C STE14P32584 239 aa2.06□□□□□ -2.08
RTT101YJL047C SEC66P33754 206 aa2.06□□□□□ -2.08
RTT101YJL047C MRPL4P36517 319 aa2.06□□□□□ -2.08
RTT101YJL047C SIC1P38634 284 aa2.06□□□□□ -2.08
RTT101YJL047C FAD1P38913 306 aa2.06□□□□□ -2.08
RTT101YJL047C SEC31P38968 1273 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C PZF1P39933 429 aa2.06□□□□□ -2.08
RTT101YJL047C IAH1P41734 238 aa2.06□□□□□ -2.08
RTT101YJL047C YFR018CP43599 363 aa2.06□□□□□ -2.08
RTT101YJL047C RPS7BP48164 190 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C PNC1P53184 216 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C YGR130CP53278 816 aa2.06□□□□□ -2.08
RTT101YJL047C ASI2P53895 289 aa2.06□□□□□ -2.08
RTT101YJL047C UBP2Q01476 1272 aa2.06□□□□□ -2.08
RTT101YJL047C MTG1Q03151 367 aaPredicted RBP2.06□□□□□ -2.08
RTT101YJL047C MSC2Q03455 724 aa2.06□□□□□ -2.08
RTT101YJL047C USA1Q03714 838 aa2.06□□□□□ -2.08
RTT101YJL047C ACL4Q03771 387 aa2.06□□□□□ -2.08
RTT101YJL047C SMA2Q04658 369 aa2.06□□□□□ -2.08
RTT101YJL047C STE23Q06010 1027 aa2.06□□□□□ -2.08
RTT101YJL047C SYT1Q06836 1226 aa2.06□□□□□ -2.08
RTT101YJL047C HBT1Q07653 1046 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C RBD2Q12270 262 aa2.06□□□□□ -2.08
RTT101YJL047C YVC1Q12324 675 aa2.06□□□□□ -2.08
RTT101YJL047C YDR461C-AQ2V2P7 80 aa2.06□□□□□ -2.08
RTT101YJL047C HRP1Q99383 534 aaKnown RBP2.06□□□□□ -2.08
RTT101YJL047C YBR085C-AO43137 85 aa2.05□□□□□ -2.08
RTT101YJL047C RPL6BP05739 176 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C SCH9P11792 824 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C RPB4P20433 221 aaPredicted RBP2.05□□□□□ -2.08
RTT101YJL047C KGD1P20967 1014 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C YCR015CP25616 317 aa2.05□□□□□ -2.08
RTT101YJL047C YCR061WP25639 631 aa2.05□□□□□ -2.08
RTT101YJL047C IDH2P28241 369 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C FAA1P30624 700 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C SRB5P32585 307 aa2.05□□□□□ -2.08
RTT101YJL047C COT1P32798 439 aa2.05□□□□□ -2.08
RTT101YJL047C BUD2P33314 1104 aa2.05□□□□□ -2.08
RTT101YJL047C PHO11P35842 467 aa2.05□□□□□ -2.08
RTT101YJL047C TUL1P36096 758 aa2.05□□□□□ -2.08
RTT101YJL047C GLG1P36143 616 aa2.05□□□□□ -2.08
RTT101YJL047C YBR139WP38109 508 aa2.05□□□□□ -2.08
RTT101YJL047C ALG14P38242 237 aa2.05□□□□□ -2.08
RTT101YJL047C PHO12P38693 467 aa2.05□□□□□ -2.08
RTT101YJL047C MNN9P39107 395 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C CEM1P39525 442 aa2.05□□□□□ -2.08
RTT101YJL047C YIL077CP40508 320 aa2.05□□□□□ -2.08
RTT101YJL047C YJL132WP47014 750 aa2.05□□□□□ -2.08
RTT101YJL047C IMO32P53219 342 aa2.05□□□□□ -2.08
RTT101YJL047C RPL6AQ02326 176 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C REC102Q02721 264 aa2.05□□□□□ -2.08
RTT101YJL047C CLU1Q03690 1277 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C RPN9Q04062 393 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C ARR3Q06598 404 aa2.05□□□□□ -2.08
RTT101YJL047C MCM21Q06675 368 aa2.05□□□□□ -2.08
RTT101YJL047C YDR061WQ12298 539 aa2.05□□□□□ -2.08
RTT101YJL047C YRM1Q12340 786 aa2.05□□□□□ -2.08
RTT101YJL047C NDJ1Q12366 352 aa2.05□□□□□ -2.08
RTT101YJL047C GIS3Q12418 502 aa2.05□□□□□ -2.08
RTT101YJL047C POM34Q12445 299 aa2.05□□□□□ -2.08
RTT101YJL047C CBP1P07252 654 aa2.05□□□□□ -2.08
RTT101YJL047C SPE1P08432 466 aa2.05□□□□□ -2.08
RTT101YJL047C GCD2P12754 651 aaPredicted RBP2.05□□□□□ -2.08
RTT101YJL047C PRP6P19735 899 aaPredicted RBP2.05□□□□□ -2.08
RTT101YJL047C KIN82P25341 720 aa2.05□□□□□ -2.08
RTT101YJL047C PRD1P25375 712 aa2.05□□□□□ -2.08
RTT101YJL047C RFA2P26754 273 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C MRPL37P36532 105 aa2.05□□□□□ -2.08
RTT101YJL047C ETP1P38748 585 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C GIP4P39732 760 aa2.05□□□□□ -2.08
RTT101YJL047C AFG3P39925 761 aa2.05□□□□□ -2.08
RTT101YJL047C SSO2P39926 295 aa2.05□□□□□ -2.08
RTT101YJL047C SCC4P40090 624 aa2.05□□□□□ -2.08
RTT101YJL047C YJL070CP40361 888 aa2.05□□□□□ -2.08
RTT101YJL047C SWP82P43554 623 aa2.05□□□□□ -2.08
RTT101YJL047C IDS2P46958 469 aa2.05□□□□□ -2.08
RTT101YJL047C YGL185CP53100 379 aa2.05□□□□□ -2.08
RTT101YJL047C STR3P53101 465 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C YGL138CP53122 345 aa2.05□□□□□ -2.08
RTT101YJL047C YGR054WP53235 642 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C MNT4P53745 580 aa2.05□□□□□ -2.08
RTT101YJL047C IPI3P53877 555 aa2.05□□□□□ -2.08
RTT101YJL047C KTR5P53966 522 aaPredicted RBP2.05□□□□□ -2.08
RTT101YJL047C BUD22Q04347 519 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C CSI1Q04368 295 aa2.05□□□□□ -2.08
RTT101YJL047C YLR297WQ05899 129 aa2.05□□□□□ -2.08
RTT101YJL047C VTA1Q06263 330 aa2.05□□□□□ -2.08
RTT101YJL047C FRE3Q08905 711 aa2.05□□□□□ -2.08
RTT101YJL047C AIM41Q12032 185 aa2.05□□□□□ -2.08
RTT101YJL047C BUG1Q12191 341 aa2.05□□□□□ -2.08
RTT101YJL047C TY1A-NL1Q12391 440 aaKnown RBP2.05□□□□□ -2.08
RTT101YJL047C YLR415CO13578 112 aa2.04□□□□□ -2.08
RTT101YJL047C HXK2P04807 486 aaKnown RBP2.04□□□□□ -2.08
RTT101YJL047C URA4P20051 364 aa2.04□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 7.4 ms