RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 UQCRFS1P1P0C7P4 283 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 ARID4AP29374 1257 aaPredicted RBP13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 GJA9P57773 515 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 IRX5P78411 483 aaPredicted RBP13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 TTLL4Q14679 1199 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 TMEM132BQ14DG7 1078 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 PTCRAQ6ISU1 281 aaPredicted RBP13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 PHOSPHO2Q8TCD6 241 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 DDX11Q96FC9 970 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 SLC9A7Q96T83 725 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 PHOX2BQ99453 314 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 NOC4LQ9BVI4 516 aaKnown RBP13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 LMCD1Q9NZU5 365 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 CFAP54Q96N23 3096 aa13.44□□□□□ -0.26
PTP4A1-207ENST00000639568 A0A1W2PRG0 241 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 CABYRO75952 493 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 SNAI1O95863 264 aaPredicted RBP13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 COPB2P35606 906 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 STAT3P40763 770 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 MCAMP43121 646 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 ACVR2BQ13705 512 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 PUS10Q3MIT2 529 aaKnown RBP13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 HFE2Q6ZVN8 426 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 USP34Q70CQ2 3546 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 ADGRA1Q86SQ6 560 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 RIOX2Q8IUF8 465 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 SPICE1Q8N0Z3 855 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 SCLYQ96I15 445 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 SEZ6LQ9BYH1 1024 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 WNT8AQ9H1J5 351 aa13.43□□□□□ -0.26
PTP4A1-207ENST00000639568 POTEB3A0JP26 581 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 IL9P15248 144 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 GUCY1A2P33402 732 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 PTPN5P54829 565 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 DYNLL1P63167 89 aaKnown RBP13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 ITGA7Q13683 1181 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 POTEBQ6S5H4 581 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 CXCL17Q6UXB2 119 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 DEFB128Q7Z7B8 93 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 CERS3Q8IU89 383 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 UPF3AQ9H1J1 476 aaKnown RBP13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
PTP4A1-207ENST00000639568 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 LPXNO60711 386 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 SHMT1P34896 483 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 MAMDC4Q6UXC1 1216 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 HERC6Q8IVU3 1022 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 SLC43A3Q8NBI5 491 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 UPF3BQ9BZI7 483 aaKnown RBP13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 ABHD16BQ9H3Z7 469 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 SH2D4AQ9H788 454 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 SIPA1L1O43166 1804 aa13.41□□□□□ -0.26
PTP4A1-207ENST00000639568 GRXCR2A6NFK2 248 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 ZEB2O60315 1214 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 B4GALT4O60513 344 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 GFRA3O60609 400 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 CYP7A1P22680 504 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 BEX3Q00994 111 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 GDPD5Q8WTR4 605 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 PRRX2Q99811 253 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 ARHGEF10LQ9HCE6 1279 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 FAM50BQ9Y247 325 aa13.4□□□□□ -0.26
PTP4A1-207ENST00000639568 SMCHD1A6NHR9 2005 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 WDR46O15213 610 aaKnown RBP13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 IGSF3O75054 1194 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 ARHGEF15O94989 841 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 SUPT20HL2P0C7V6 817 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 KIAA1755Q5JYT7 1200 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 TTC39AQ5SRH9 613 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 MIGA1Q8NAN2 632 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 ANKS1AQ92625 1134 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 AGBL1Q96MI9 1066 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 ZBED2Q9BTP6 218 aa13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 FTOQ9C0B1 505 aaKnown RBP eCLIP13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.39□□□□□ -0.27
PTP4A1-207ENST00000639568 VWA5AO00534 786 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 ADCY6O43306 1168 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 PLCD1P51178 756 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 CCDC158Q5M9N0 1113 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 TMEM179Q6ZVK1 233 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 ZNF467Q7Z7K2 595 aaPredicted RBP13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 AP5M1Q9H0R1 490 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 VCPKMTQ9H867 229 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 ADAMTS5Q9UNA0 930 aa13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
PTP4A1-207ENST00000639568 ZDBF2Q9HCK1 2354 aa13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 SRGAP3O43295 1099 aa13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 RFC2P35250 354 aa13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 KCNJ6P48051 423 aa13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 SLC4A3P48751 1232 aa13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 TNFAIP2Q03169 654 aa13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
PTP4A1-207ENST00000639568 PRSS33Q8NF86 280 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms