RNA–Protein interactions for RNA: ENST00000639083.1

TARDBP-230, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TARDBP, Length 2,269 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-230ENST00000639083 A0A087X0B3 334 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 ZNF543Q08ER8 600 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 INF2Q27J81 1249 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 TTBK2Q6IQ55 1244 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 SYMPKQ92797 1274 aaKnown RBP12.3□□□□□ -0.44
TARDBP-230ENST00000639083 IL17AQ16552 155 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 TATDN1Q6P1N9 297 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 ELOA2Q8IYF1 753 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-230ENST00000639083 GRAMD1CQ8IYS0 662 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 C4orf32Q8N8J7 132 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
TARDBP-230ENST00000639083 GMLQ99445 158 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 PIM2Q9P1W9 311 aa12.3□□□□□ -0.44
TARDBP-230ENST00000639083 ZNF646O15015 1829 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-230ENST00000639083 CLRN2A0PK11 232 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 SPDYE2BA6NHP3 402 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 TCP10L2B9ZVM9 353 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 ACTN4O43707 911 aaKnown RBP12.29□□□□□ -0.44
TARDBP-230ENST00000639083 RAD21O60216 631 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 ENTPD3O75355 529 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 SPDYE6P0CI01 402 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 EEF2P13639 858 aaKnown RBP12.29□□□□□ -0.44
TARDBP-230ENST00000639083 GNA11P29992 359 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 SLC16A2P36021 539 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 ZNF75DP51815 510 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 POSTNQ15063 836 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 SOGA3Q5TF21 947 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 KCTD1Q719H9 257 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 PLA2G4DQ86XP0 818 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 ADGRF4Q8IZF3 695 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 FAM177A1Q8N128 213 aaPredicted RBP12.29□□□□□ -0.44
TARDBP-230ENST00000639083 OGFOD1Q8N543 542 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 COA7Q96BR5 231 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 DHX58Q96C10 678 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 HOOK1Q9UJC3 728 aaKnown RBP12.29□□□□□ -0.44
TARDBP-230ENST00000639083 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
TARDBP-230ENST00000639083 COL4A5P29400 1685 aa12.29□□□□□ -0.44
TARDBP-230ENST00000639083 GDF11O95390 407 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 PRR29P0C7W0 189 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 SEPT2Q15019 361 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 SIAH1Q8IUQ4 282 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 CSRNP1Q96S65 589 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 BPIFA3Q9BQP9 254 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 TTC12Q9H892 705 aaPredicted RBP12.28□□□□□ -0.44
TARDBP-230ENST00000639083 KANSL2Q9H9L4 492 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 JMJD4Q9H9V9 463 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 PPP1R1BQ9UD71 204 aaPredicted RBP12.28□□□□□ -0.44
TARDBP-230ENST00000639083 TGFB2P61812 414 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 DLGAP5Q15398 846 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 CCDC96Q2M329 555 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 GPATCH4Q5T3I0 446 aaKnown RBP12.28□□□□□ -0.44
TARDBP-230ENST00000639083 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 ZNRF3Q9ULT6 936 aa12.28□□□□□ -0.44
TARDBP-230ENST00000639083 BMP6P22004 513 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 JAG1P78504 1218 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 ABCB5Q2M3G0 1257 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 PPP4R3BQ5MIZ7 849 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.44
TARDBP-230ENST00000639083 KANK3Q6NY19 840 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 SARM1Q6SZW1 724 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 NIM1KQ8IY84 436 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 MKL1Q969V6 931 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 NYAP2Q9P242 653 aa12.27□□□□□ -0.44
TARDBP-230ENST00000639083 BIN2Q9UBW5 565 aaPredicted RBP12.27□□□□□ -0.44
TARDBP-230ENST00000639083 ATRNL1Q5VV63 1379 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 SLFN14P0C7P3 912 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 CDC25AP30304 524 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 JAKMIP3Q5VZ66 844 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 TMEM179Q6ZVK1 233 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 DRC7Q8IY82 874 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 VPS33BQ9H267 617 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 TMEM60Q9H2L4 133 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 TMOD2Q9NZR1 351 aa12.27□□□□□ -0.45
TARDBP-230ENST00000639083 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-230ENST00000639083 ZNF70Q9UC06 446 aaPredicted RBP12.27□□□□□ -0.45
TARDBP-230ENST00000639083 MYH8P13535 1937 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 PNMA6FA0A0J9YX94 578 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 USP17L10C9JJH3 530 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 PPP1R11O60927 126 aaPredicted RBP12.26□□□□□ -0.45
TARDBP-230ENST00000639083 POLD1P28340 1107 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 AFMP43652 599 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 SARSP49591 514 aaKnown RBP12.26□□□□□ -0.45
TARDBP-230ENST00000639083 ICA1Q05084 483 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 CXCL9Q07325 125 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 RRP1BQ14684 758 aaKnown RBP12.26□□□□□ -0.45
TARDBP-230ENST00000639083 NCAPHQ15003 741 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 NONOQ15233 471 aaKnown RBP eCLIP12.26□□□□□ -0.45
TARDBP-230ENST00000639083 LETM2Q2VYF4 491 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 DALRD3Q5D0E6 543 aaKnown RBP12.26□□□□□ -0.45
TARDBP-230ENST00000639083 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 KRT25Q7Z3Z0 450 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 CCDC125Q86Z20 511 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 SMARCE1Q969G3 411 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 TMEM260Q9NX78 707 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 MAN1B1Q9UKM7 699 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 SIPA1L1O43166 1804 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 ESYT2A0FGR8 921 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 hCG_1984214I3L0E3 225 aa12.26□□□□□ -0.45
TARDBP-230ENST00000639083 CCNT1O60563 726 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 173.7 ms