RNA–Protein interactions for RNA: ENST00000635856.1

CHD2-221, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-221ENST00000635856 ATP10AO60312 1499 aa6.74□□□□□ -1.33
CHD2-221ENST00000635856 TMEM221A6NGB7 291 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 TMEM110-MUSTN1A8MSY1 372 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 LCA5LO95447 670 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 NFKBIAP25963 317 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 SMARCA1P28370 1054 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 MDH1P40925 334 aaKnown RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 USP14P54578 494 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 TAF7Q15545 349 aaPredicted RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.73□□□□□ -1.33
CHD2-221ENST00000635856 PARP10Q53GL7 1025 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 RUFY4Q6ZNE9 571 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 ANKRD13BQ86YJ7 626 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 LRRC49Q8IUZ0 686 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 FAF1Q9UNN5 650 aaPredicted RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 MTMR6Q9Y217 621 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 PLCH2O75038 1416 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 CCDC160A6NGH7 325 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 HNRNPRO43390 633 aaKnown RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 MTRF1O75570 445 aaKnown RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 GUCY1A3Q02108 690 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 TBL3Q12788 808 aaKnown RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 HLTFQ14527 1009 aaKnown RBP eCLIP6.73□□□□□ -1.338e-8■■■□□ 18
CHD2-221ENST00000635856 SIX5Q8N196 739 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 KLHL29Q96CT2 875 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 PCMTD2Q9NV79 361 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 SLC5A4Q9NY91 659 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 DDX25Q9UHL0 483 aaKnown RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 CYP46A1Q9Y6A2 500 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 SLC4A7Q9Y6M7 1214 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 SRRM3A6NNA2 597 aaPredicted RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 GSTA1P08263 222 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 ERCC5P28715 1186 aaPredicted RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 CLPPQ16740 277 aaPredicted RBP6.73□□□□□ -1.33
CHD2-221ENST00000635856 ZMYM1Q5SVZ6 1142 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 TAOK1Q7L7X3 1001 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 MYO1HQ8N1T3 1032 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 TTC30BQ8N4P2 665 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.73□□□□□ -1.331e-6■■■■■ 56.2
CHD2-221ENST00000635856 SMC6Q96SB8 1091 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 WWC3Q9ULE0 1092 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 UBN2Q6ZU65 1347 aa6.73□□□□□ -1.33
CHD2-221ENST00000635856 OPLAHO14841 1288 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 CNGA3Q16281 694 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 KAZNQ674X7 775 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 PPP4R3AQ6IN85 833 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 KDM7AQ6ZMT4 941 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 CATIPQ7Z7H3 387 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 DAAM2Q86T65 1068 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 SPATA24Q86W54 205 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 FSIP1Q8NA03 581 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 AGAP11Q8TF27 550 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 SEC16BQ96JE7 1060 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 ZNF570Q96NI8 536 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 DUSP9Q99956 384 aaKnown RBP6.72□□□□□ -1.33
CHD2-221ENST00000635856 IRF2BPLQ9H1B7 796 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 MRGBPQ9NV56 204 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 EURLQ9NYK6 297 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 KIAA1468Q9P260 1216 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 CYP27B1O15528 508 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 SLC3A2P08195 630 aaKnown RBP6.72□□□□□ -1.33
CHD2-221ENST00000635856 POTEJP0CG39 1038 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 RFC5P40937 340 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 ZNF131P52739 623 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 EPHB4P54760 987 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 ADARP55265 1226 aaKnown RBP6.72□□□□□ -1.33
CHD2-221ENST00000635856 TUBA4AP68366 448 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 SGSM1Q2NKQ1 1148 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 C11orf74Q86VG3 221 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 FAM186BQ8IYM0 893 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 IFT81Q8WYA0 676 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 ESYT1Q9BSJ8 1104 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 NACAP1Q9BZK3 213 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 CLASP1Q7Z460 1538 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 TRIM64CA6NLI5 447 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 TRIM37O94972 964 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 APOEP02649 317 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 TUFMP49411 452 aaKnown RBP6.72□□□□□ -1.33
CHD2-221ENST00000635856 FKBP15Q5T1M5 1219 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 NUTM2DQ5VT03 806 aaPredicted RBP6.72□□□□□ -1.33
CHD2-221ENST00000635856 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 SLC43A3Q8NBI5 491 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 SH3GL2Q99962 352 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 API5Q9BZZ5 524 aaKnown RBP6.72□□□□□ -1.33
CHD2-221ENST00000635856 DMRT2Q9Y5R5 561 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 COMMD3-BMI1R4GMX3 469 aa6.72□□□□□ -1.33
CHD2-221ENST00000635856 STAM2O75886 525 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 PDE5AO76074 875 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 PCYT1AP49585 367 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 FOSBP53539 338 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 SEC24CP53992 1094 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 MRPS25P82663 173 aaKnown RBP6.71□□□□□ -1.33
CHD2-221ENST00000635856 COG7P83436 770 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 SAFBQ15424 915 aaKnown RBP eCLIP6.71□□□□□ -1.33
CHD2-221ENST00000635856 ALDH1L2Q3SY69 923 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 CREB3L3Q68CJ9 461 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 RBM43Q6ZSC3 357 aaKnown RBP6.71□□□□□ -1.33
CHD2-221ENST00000635856 NLRP9Q7RTR0 991 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 FAM228AQ86W67 206 aa6.71□□□□□ -1.33
CHD2-221ENST00000635856 MORC4Q8TE76 937 aa6.71□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms