RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 FBXO18Q8NFZ0 1043 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 HVCN1Q96D96 273 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CEP295NLQ96MC4 621 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 TRIM8Q9BZR9 551 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 BRD8Q9H0E9 1235 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 HPS4Q9NQG7 708 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 FAM184BQ9ULE4 1060 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC171Q6TFL3 1326 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 AP3B1O00203 1094 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 RTCAO00442 366 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 IFRD1O00458 451 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 PRMT3O60678 531 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 RNF8O76064 485 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 TSPOAP1O95153 1857 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 EPN2O95208 641 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SEPT6Q14141 434 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC183Q5T5S1 534 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 PPP1R18Q6NYC8 613 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 C3orf67Q6ZVT6 689 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 BRSK1Q8TDC3 778 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SEPT8Q92599 483 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 EXOC4Q96A65 974 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 EPAS1Q99814 870 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 ALG1Q9BT22 464 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 VPS37BQ9H9H4 285 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 AATFQ9NY61 560 aaKnown RBP eCLIP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 STK39Q9UEW8 545 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 IFT172Q9UG01 1749 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC4A4Q9Y6R1 1079 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 ATP10AO60312 1499 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 COL17A1Q9UMD9 1497 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 A6NCN8 305 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 GOLGA8JA6NMD2 632 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 GOLGA8TH3BQL2 631 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 PER1O15534 1290 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 KLHL41O60662 606 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 NBNO60934 754 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 LDHBP07195 334 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 GOLGA8HP0CJ92 632 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 TOP1P11387 765 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 MLLT1Q03111 559 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 TPD52L1Q16890 204 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 KMT5BQ4FZB7 885 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 KCNV1Q6PIU1 500 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 KRT77Q7Z794 578 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SLC7A5P1Q8MH63 180 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 OR8H2Q8N162 312 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 C17orf53Q8N3J3 647 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SPATA5Q8NB90 893 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SCG3Q8WXD2 468 aaKnown RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 E2F7Q96AV8 911 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 NLRP4Q96MN2 994 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 DBNDD1Q9H9R9 158 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CROTQ9UKG9 612 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CHIC2Q9UKJ5 165 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 TPCN1Q9ULQ1 816 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 COLQQ9Y215 455 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 MUC3AQ02505 3323 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 EVC2Q86UK5 1308 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 SLIT1O75093 1534 aa4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 CEP170BQ9Y4F5 1589 aaPredicted RBP4.31□□□□□ -1.72
R3HDM1-220ENST00000628915 LTBP4Q8N2S1 1624 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 A0A087WUV0 522 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 POTEFA5A3E0 1075 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ONECUT3O60422 494 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SLU7O95391 586 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 MYCP01106 439 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TUBB4AP04350 444 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 LMOD1P29536 600 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 GNALP38405 381 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PDE6CP51160 858 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NLRP6P59044 892 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ITGB3BPQ13352 177 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 STK38Q15208 465 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PUM3Q15397 648 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PPP1R7Q15435 360 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 CCDC57Q2TAC2 916 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 ALFQ53S48 1182 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 HABP4Q5JVS0 413 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 NXNQ6DKJ4 435 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RSPH3Q86UC2 560 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 RAVER1Q8IY67 606 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 CKAP2LQ8IYA6 745 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 IQUBQ8NA54 791 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 HDAC7Q8WUI4 952 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TBC1D20Q96BZ9 403 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 UBN1Q9NPG3 1134 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PFDN4Q9NQP4 134 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PSD3Q9NYI0 1048 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 EDARQ9UNE0 448 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TBX22Q9Y458 520 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 SCAF11Q99590 1463 aaKnown RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DMDP11532 3685 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 A0A0B4J203 849 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 MACROD2A1Z1Q3 448 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 DNAJC8O75937 253 aaPredicted RBP4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 PDHA1P08559 390 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TNFAIP3P21580 790 aa4.3□□□□□ -1.72
R3HDM1-220ENST00000628915 TXLNAP40222 546 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms