RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 LENG1Q96BZ8 264 aaPredicted RBP22.67■■□□□ 1.22
SMN2-215ENST00000628696 TEX13BQ9BXU2 312 aa22.67■■□□□ 1.22
SMN2-215ENST00000628696 ZNF865P0CJ78 1059 aaPredicted RBP22.66■■□□□ 1.22
SMN2-215ENST00000628696 AKR1A1P14550 325 aa22.66■■□□□ 1.22
SMN2-215ENST00000628696 C1orf53Q5VUE5 145 aa22.66■■□□□ 1.22
SMN2-215ENST00000628696 PRPF38AQ8NAV1 312 aaKnown RBP22.66■■□□□ 1.22
SMN2-215ENST00000628696 GUCD1Q96NT3 240 aa22.66■■□□□ 1.22
SMN2-215ENST00000628696 DCTPP1Q9H773 170 aa22.66■■□□□ 1.22
SMN2-215ENST00000628696 RIPK3Q9Y572 518 aa22.66■■□□□ 1.22
SMN2-215ENST00000628696 GPAA1O43292 621 aa22.65■■□□□ 1.22
SMN2-215ENST00000628696 ZBED4O75132 1171 aa22.65■■□□□ 1.22
SMN2-215ENST00000628696 PRDM1O75626 825 aa22.65■■□□□ 1.22
SMN2-215ENST00000628696 KIFC2Q96AC6 838 aa22.65■■□□□ 1.22
SMN2-215ENST00000628696 TACC3Q9Y6A5 838 aa22.65■■□□□ 1.22
SMN2-215ENST00000628696 A0A1W2PQ45 241 aaPredicted RBP22.64■■□□□ 1.21
SMN2-215ENST00000628696 A0A1W2PQY0 241 aa22.64■■□□□ 1.21
SMN2-215ENST00000628696 M0R2C6 588 aa22.64■■□□□ 1.21
SMN2-215ENST00000628696 PQBP1O60828 265 aaKnown RBP22.64■■□□□ 1.21
SMN2-215ENST00000628696 ZFYP08048 801 aaPredicted RBP22.64■■□□□ 1.21
SMN2-215ENST00000628696 ZNF287Q9HBT7 754 aa22.64■■□□□ 1.21
SMN2-215ENST00000628696 EPB41L4AQ9HCS5 686 aaPredicted RBP22.64■■□□□ 1.21
SMN2-215ENST00000628696 ZHX1Q9UKY1 873 aaPredicted RBP22.64■■□□□ 1.21
SMN2-215ENST00000628696 ROBO3Q96MS0 1386 aa22.63■■□□□ 1.21
SMN2-215ENST00000628696 CLTBP09497 229 aa22.63■■□□□ 1.21
SMN2-215ENST00000628696 GNAT2P19087 354 aa22.63■■□□□ 1.21
SMN2-215ENST00000628696 CEP95Q96GE4 821 aa22.63■■□□□ 1.21
SMN2-215ENST00000628696 RAVER2Q9HCJ3 691 aaKnown RBP22.63■■□□□ 1.21
SMN2-215ENST00000628696 FAM184BQ9ULE4 1060 aa22.63■■□□□ 1.21
SMN2-215ENST00000628696 A0A0C4DFX4 3053 aa22.63■■□□□ 1.21
SMN2-215ENST00000628696 MCM3APO60318 1980 aa22.62■■□□□ 1.21
SMN2-215ENST00000628696 IGKV6D-41A0A0C4DH26 115 aa22.62■■□□□ 1.21
SMN2-215ENST00000628696 SNAI1O95863 264 aaPredicted RBP22.62■■□□□ 1.21
SMN2-215ENST00000628696 RAG1P15918 1043 aa22.62■■□□□ 1.21
SMN2-215ENST00000628696 LRRC47Q8N1G4 583 aaKnown RBP22.62■■□□□ 1.21
SMN2-215ENST00000628696 MSL3Q8N5Y2 521 aaKnown RBP22.62■■□□□ 1.21
SMN2-215ENST00000628696 ISY1Q9ULR0 285 aaKnown RBP22.62■■□□□ 1.21
SMN2-215ENST00000628696 SYNGAP1Q96PV0 1343 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
SMN2-215ENST00000628696 ADAMTS4O75173 837 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 ITGB8P26012 769 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 LRRFIP1Q32MZ4 808 aaKnown RBP22.61■■□□□ 1.21
SMN2-215ENST00000628696 IFNL3Q8IZI9 196 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 ANKRD35Q8N283 1001 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 TSEN34Q9BSV6 310 aaKnown RBP22.61■■□□□ 1.21
SMN2-215ENST00000628696 STARD7Q9NQZ5 370 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 TMEM39AQ9NV64 488 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 MTMR4Q9NYA4 1195 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 FEM1BQ9UK73 627 aa22.61■■□□□ 1.21
SMN2-215ENST00000628696 SYNRGQ9UMZ2 1314 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 LAMA2P24043 3122 aaKnown RBP22.6■■□□□ 1.21
SMN2-215ENST00000628696 DNAJC25-GNG10A0A024R161 153 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 TTLL1O95922 423 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 ACLYP53396 1101 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 MKL1Q969V6 931 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 SEC62Q99442 399 aaKnown RBP22.6■■□□□ 1.21
SMN2-215ENST00000628696 NACAP1Q9BZK3 213 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 SEMA6BQ9H3T3 888 aa22.6■■□□□ 1.21
SMN2-215ENST00000628696 CUL9Q8IWT3 2517 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 ATP2A1O14983 1001 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 KIAA0355O15063 1070 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 TSPY3P0CV98 308 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 TSPY8P0CW00 308 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 KCNA10Q16322 511 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 SLFN13Q68D06 897 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 MAMDC4Q6UXC1 1216 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 NUP133Q8WUM0 1156 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 CHMP4CQ96CF2 233 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 CDX2Q99626 313 aaPredicted RBP22.59■■□□□ 1.21
SMN2-215ENST00000628696 SLC38A10Q9HBR0 1119 aa22.59■■□□□ 1.21
SMN2-215ENST00000628696 DCDC2CA8MYV0 355 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 EPHB4P54760 987 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 SMAD3P84022 425 aaKnown RBP22.58■■□□□ 1.21
SMN2-215ENST00000628696 PDE4BQ07343 736 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 ACVR2BQ13705 512 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.58■■□□□ 1.21
SMN2-215ENST00000628696 KLHDC9Q8NEP7 349 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 VTI1AQ96AJ9 217 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 RNPC3Q96LT9 517 aaKnown RBP22.58■■□□□ 1.21
SMN2-215ENST00000628696 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.58■■□□□ 1.21
SMN2-215ENST00000628696 FBXO40Q9UH90 709 aa22.58■■□□□ 1.21
SMN2-215ENST00000628696 MYADML2A6NDP7 307 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 DUSP11O75319 330 aaKnown RBP22.57■■□□□ 1.2
SMN2-215ENST00000628696 SLC3A2P08195 630 aaKnown RBP22.57■■□□□ 1.2
SMN2-215ENST00000628696 BMP3P12645 472 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 TFAP4Q01664 338 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 ZNF467Q7Z7K2 595 aaPredicted RBP22.57■■□□□ 1.2
SMN2-215ENST00000628696 GMCL1P1Q8NEA9 526 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 CHST13Q8NET6 341 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 NEDD1Q8NHV4 660 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 FSD1Q9BTV5 496 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 NAPBQ9H115 298 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 HOMER2Q9NSB8 354 aa22.57■■□□□ 1.2
SMN2-215ENST00000628696 MOXD2PA6NHM9 499 aa22.56■■□□□ 1.2
SMN2-215ENST00000628696 TMEM232C9JQI7 657 aa22.56■■□□□ 1.2
SMN2-215ENST00000628696 ERC2O15083 957 aa22.56■■□□□ 1.2
SMN2-215ENST00000628696 C6orf222P0C671 652 aaPredicted RBP22.56■■□□□ 1.2
SMN2-215ENST00000628696 IRX5P78411 483 aaPredicted RBP22.56■■□□□ 1.2
SMN2-215ENST00000628696 FPGSQ05932 587 aa22.56■■□□□ 1.2
SMN2-215ENST00000628696 FAAP100Q0VG06 881 aa22.56■■□□□ 1.2
SMN2-215ENST00000628696 SPC25Q9HBM1 224 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms