RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 MSL3Q8N5Y2 521 aaKnown RBP10.44□□□□□ -0.74
CHD2-212ENST00000627622 REPS2Q8NFH8 660 aa10.44□□□□□ -0.74
CHD2-212ENST00000627622 NUP133Q8WUM0 1156 aa10.44□□□□□ -0.74
CHD2-212ENST00000627622 SYMPKQ92797 1274 aaKnown RBP10.44□□□□□ -0.74
CHD2-212ENST00000627622 DDRGK1Q96HY6 314 aa10.44□□□□□ -0.74
CHD2-212ENST00000627622 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.44□□□□□ -0.74
CHD2-212ENST00000627622 CNPY2Q9Y2B0 182 aa10.44□□□□□ -0.74
CHD2-212ENST00000627622 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.43□□□□□ -0.74
CHD2-212ENST00000627622 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.43□□□□□ -0.74
CHD2-212ENST00000627622 RAD21O60216 631 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 ACLYP53396 1101 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 FAM83BQ5T0W9 1011 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 RPAP2Q8IXW5 612 aaPredicted RBP10.43□□□□□ -0.74
CHD2-212ENST00000627622 PANK1Q8TE04 598 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 LENG1Q96BZ8 264 aaPredicted RBP10.43□□□□□ -0.74
CHD2-212ENST00000627622 BCL11AQ9H165 835 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 BOLA2Q9H3K6 86 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 STARD7Q9NQZ5 370 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 SYNRGQ9UMZ2 1314 aa10.43□□□□□ -0.74
CHD2-212ENST00000627622 MOXD2PA6NHM9 499 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 HMMRO75330 724 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 TIMP1P01033 207 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 ATP5JP18859 108 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 DNAJB2P25686 324 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 GRIN2CQ14957 1233 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 UBE3CQ15386 1083 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 CTR9Q6PD62 1173 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 KLHDC9Q8NEP7 349 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 FAM184BQ9ULE4 1060 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 SLC4A4Q9Y6R1 1079 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 TTC28Q96AY4 2481 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 ZBED9Q6R2W3 1325 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 GBF1Q92538 1859 aa10.42□□□□□ -0.74
CHD2-212ENST00000627622 RAB11FIP3O75154 756 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 SNAI1O95863 264 aaPredicted RBP10.41□□□□□ -0.74
CHD2-212ENST00000627622 KCNA10Q16322 511 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 CCSAPQ6IQ19 270 aaPredicted RBP10.41□□□□□ -0.74
CHD2-212ENST00000627622 MAMDC4Q6UXC1 1216 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 DDX11Q96FC9 970 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 HAUS7Q99871 368 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 SLF1Q9BQI6 1058 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 TEX13BQ9BXU2 312 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 ZNF576Q9H609 170 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 MROH7Q68CQ1 1323 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 DNAJC25-GNG10A0A024R161 153 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 DUSP11O75319 330 aaKnown RBP10.41□□□□□ -0.74
CHD2-212ENST00000627622 CHGBP05060 677 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 HNRNPUQ00839 825 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD2-212ENST00000627622 SNRNP48Q6IEG0 339 aaKnown RBP10.41□□□□□ -0.74
CHD2-212ENST00000627622 MFSD5Q6N075 450 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 ZNF467Q7Z7K2 595 aaPredicted RBP10.41□□□□□ -0.74
CHD2-212ENST00000627622 SIRT2Q8IXJ6 389 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 PRPF38AQ8NAV1 312 aaKnown RBP10.41□□□□□ -0.74
CHD2-212ENST00000627622 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD2-212ENST00000627622 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.41□□□□□ -0.74
CHD2-212ENST00000627622 TBX21Q9UL17 535 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 RIPK3Q9Y572 518 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 ELP1O95163 1332 aa10.41□□□□□ -0.74
CHD2-212ENST00000627622 ATP2A1O14983 1001 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 MS4A1P11836 297 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 CST5P28325 142 aaPredicted RBP10.4□□□□□ -0.74
CHD2-212ENST00000627622 CDK7P50613 346 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 TJAP1Q5JTD0 557 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 ZSCAN25Q6NSZ9 544 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 CCDC174Q6PII3 467 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 PCSK9Q8NBP7 692 aaKnown RBP10.4□□□□□ -0.74
CHD2-212ENST00000627622 TIFAQ96CG3 184 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 GLT1D1Q96MS3 346 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 NUP88Q99567 741 aaPredicted RBP10.4□□□□□ -0.74
CHD2-212ENST00000627622 PUS7LQ9H0K6 701 aaKnown RBP10.4□□□□□ -0.74
CHD2-212ENST00000627622 NYAP2Q9P242 653 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 ARPP21Q9UBL0 812 aaPredicted RBP10.4□□□□□ -0.74
CHD2-212ENST00000627622 ZHX1Q9UKY1 873 aaPredicted RBP10.4□□□□□ -0.74
CHD2-212ENST00000627622 MUC3AQ02505 3323 aa10.4□□□□□ -0.74
CHD2-212ENST00000627622 MYADML2A6NDP7 307 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 F5H6K3 240 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 ASGR1P07306 291 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 C6orf222P0C671 652 aaPredicted RBP10.39□□□□□ -0.75
CHD2-212ENST00000627622 RASA1P20936 1047 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 KLRC3Q07444 240 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 PPIGQ13427 754 aaKnown RBP eCLIP10.39□□□□□ -0.75
CHD2-212ENST00000627622 ACVR2BQ13705 512 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 SBK1Q52WX2 424 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 USP38Q8NB14 1042 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 VTI1AQ96AJ9 217 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 ABHD16BQ9H3Z7 469 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 MKNK2Q9HBH9 465 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 SPC25Q9HBM1 224 aa10.39□□□□□ -0.75
CHD2-212ENST00000627622 ZBED4O75132 1171 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 NDUFB10O96000 172 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 SLC4A3P48751 1232 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 GJA9P57773 515 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 CCDC144BQ3MJ40 725 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 TMEM240Q5SV17 173 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.38□□□□□ -0.75
CHD2-212ENST00000627622 C16orf59Q7L2K0 433 aa10.38□□□□□ -0.75
CHD2-212ENST00000627622 CPXCR1Q8N123 301 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms