RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 MIGA2Q7L4E1 593 aa24.58■■□□□ 1.53
SPAST-204ENST00000621856 DAGLBQ8NCG7 672 aa24.58■■□□□ 1.53
SPAST-204ENST00000621856 SLC1A4P43007 532 aa24.58■■□□□ 1.52
SPAST-204ENST00000621856 SNW1Q13573 536 aaKnown RBP24.58■■□□□ 1.52
SPAST-204ENST00000621856 KIF4BQ2VIQ3 1234 aa24.58■■□□□ 1.52
SPAST-204ENST00000621856 ADGRF4Q8IZF3 695 aa24.58■■□□□ 1.52
SPAST-204ENST00000621856 KRI1Q8N9T8 703 aaKnown RBP24.58■■□□□ 1.52
SPAST-204ENST00000621856 ENGASEQ8NFI3 743 aa24.58■■□□□ 1.52
SPAST-204ENST00000621856 H7C1D1 291 aa24.57■■□□□ 1.52
SPAST-204ENST00000621856 hCG_1984214I3L0E3 225 aa24.57■■□□□ 1.52
SPAST-204ENST00000621856 ADAMTS3O15072 1205 aa24.57■■□□□ 1.52
SPAST-204ENST00000621856 NDUFA8P51970 172 aa24.57■■□□□ 1.52
SPAST-204ENST00000621856 TTC38Q5R3I4 469 aa24.57■■□□□ 1.52
SPAST-204ENST00000621856 ZNF713Q8N859 430 aaPredicted RBP24.57■■□□□ 1.52
SPAST-204ENST00000621856 C6orf50Q9HD87 102 aa24.57■■□□□ 1.52
SPAST-204ENST00000621856 SCAF8Q9UPN6 1271 aaKnown RBP24.57■■□□□ 1.52
SPAST-204ENST00000621856 SLC16A2P36021 539 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 CKAP2LQ8IYA6 745 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 FMR1NBQ8N0W7 255 aaPredicted RBP24.56■■□□□ 1.52
SPAST-204ENST00000621856 GMCL1P1Q8NEA9 526 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 JMJD4Q9H9V9 463 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 ARHGEF10LQ9HCE6 1279 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 PGAP2Q9UHJ9 254 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 ZBTB21Q9ULJ3 1066 aa24.56■■□□□ 1.52
SPAST-204ENST00000621856 CCDC194A0A1B0GVG4 234 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 F5H6K3 240 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 BMP15O95972 392 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 TRAPPC10P48553 1259 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 KLRC3Q07444 240 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 RASGRP4Q8TDF6 673 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 CLIC6Q96NY7 704 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 ZMYND12Q9H0C1 365 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 PNMA6FA0A0J9YX94 578 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 SMCO2A6NFE2 343 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 CTAGE5O15320 804 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 PFKFB1P16118 471 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 GNA11P29992 359 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 PANK2Q9BZ23 570 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 HACL1Q9UJ83 578 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 PCDHA6Q9UN73 950 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 PCDHA8Q9Y5H6 950 aa24.55■■□□□ 1.52
SPAST-204ENST00000621856 NDUFB10O96000 172 aa24.54■■□□□ 1.52
SPAST-204ENST00000621856 CCDC192P0DO97 292 aa24.54■■□□□ 1.52
SPAST-204ENST00000621856 ZNF174Q15697 407 aa24.54■■□□□ 1.52
SPAST-204ENST00000621856 SHC4Q6S5L8 630 aa24.54■■□□□ 1.52
SPAST-204ENST00000621856 RBM43Q6ZSC3 357 aaKnown RBP24.54■■□□□ 1.52
SPAST-204ENST00000621856 FUCA2Q9BTY2 467 aa24.54■■□□□ 1.52
SPAST-204ENST00000621856 FBXO2Q9UK22 296 aaPredicted RBP24.54■■□□□ 1.52
SPAST-204ENST00000621856 ASTN2O75129 1339 aaPredicted RBP24.54■■□□□ 1.52
SPAST-204ENST00000621856 SBF1O95248 1867 aa24.54■■□□□ 1.52
SPAST-204ENST00000621856 M0R2N6 131 aa24.53■■□□□ 1.52
SPAST-204ENST00000621856 PTPREP23469 700 aa24.53■■□□□ 1.52
SPAST-204ENST00000621856 RESP18Q5W5W9 173 aa24.53■■□□□ 1.52
SPAST-204ENST00000621856 RNF214Q8ND24 703 aa24.53■■□□□ 1.52
SPAST-204ENST00000621856 GMCL1Q96IK5 515 aa24.53■■□□□ 1.52
SPAST-204ENST00000621856 SYNPO2Q9UMS6 1093 aa24.53■■□□□ 1.52
SPAST-204ENST00000621856 USP17L10C9JJH3 530 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 COA7Q96BR5 231 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 SYT17Q9BSW7 474 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 SRPRBQ9Y5M8 271 aaKnown RBP24.52■■□□□ 1.52
SPAST-204ENST00000621856 A0A1W2PRG0 241 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 ESYT2A0FGR8 921 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 WNT7AO00755 349 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 CAP2P40123 477 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 MAP3K10Q02779 954 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 GPC2Q8N158 579 aa24.52■■□□□ 1.52
SPAST-204ENST00000621856 NUP88Q99567 741 aaPredicted RBP24.52■■□□□ 1.52
SPAST-204ENST00000621856 MORC2Q9Y6X9 1032 aaPredicted RBP24.52■■□□□ 1.52
SPAST-204ENST00000621856 ZBTB5O15062 677 aa24.51■■□□□ 1.51
SPAST-204ENST00000621856 SYKP43405 635 aa24.51■■□□□ 1.51
SPAST-204ENST00000621856 IKQ13123 557 aaPredicted RBP24.51■■□□□ 1.51
SPAST-204ENST00000621856 KRT25Q7Z3Z0 450 aa24.51■■□□□ 1.51
SPAST-204ENST00000621856 TEPSINQ96N21 525 aa24.51■■□□□ 1.51
SPAST-204ENST00000621856 SDF4Q9BRK5 362 aa24.51■■□□□ 1.51
SPAST-204ENST00000621856 MRVI1Q9Y6F6 885 aa24.51■■□□□ 1.51
SPAST-204ENST00000621856 ZNF202O95125 648 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 BMP3P12645 472 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 PPP1R18Q6NYC8 613 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 SASS6Q6UVJ0 657 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 ACER1Q8TDN7 264 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 MTMR8Q96EF0 704 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 ATAD5Q96QE3 1844 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 GOPCQ9HD26 462 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 FAM13BQ9NYF5 915 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 GPRC5DQ9NZD1 345 aa24.5■■□□□ 1.51
SPAST-204ENST00000621856 ECE1P42892 770 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 ADCY7P51828 1080 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 TYRO3Q06418 890 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 ZNF579Q8NAF0 562 aaKnown RBP24.49■■□□□ 1.51
SPAST-204ENST00000621856 DEFB129Q9H1M3 183 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 HPSEQ9Y251 543 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 TMX2Q9Y320 296 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 FAM237AA0A1B0GTK4 181 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 ASNSP08243 561 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 MCM7P33993 719 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 GRIN1Q05586 938 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 ANP32BQ92688 251 aaKnown RBP24.49■■□□□ 1.51
SPAST-204ENST00000621856 SH2D4AQ9H788 454 aa24.49■■□□□ 1.51
SPAST-204ENST00000621856 PPP1R11O60927 126 aaPredicted RBP24.48■■□□□ 1.51
SPAST-204ENST00000621856 PTGDRQ13258 359 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms