RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 HOXC10Q9NYD6 342 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 MGAMO43451 1857 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 TCHHQ07283 1943 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 PTPDC1A2A3K4 754 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 VCAM1P19320 739 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 ADD1P35611 737 aaKnown RBP12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 IRX3P78415 501 aaPredicted RBP12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 FMR1Q06787 632 aaKnown RBP eCLIP12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 SREBF2Q12772 1141 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 FAM83BQ5T0W9 1011 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 SPRYD7Q5W111 196 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 KCTD1Q719H9 257 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 SPICE1Q8N0Z3 855 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 SLF1Q9BQI6 1058 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 SLC26A6Q9BXS9 759 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 ZCCHC17Q9NP64 241 aaKnown RBP12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 ORC3Q9UBD5 711 aaPredicted RBP12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 AGTPBP1Q9UPW5 1226 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 SLC45A1Q9Y2W3 748 aa12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 FRMPD2Q68DX3 1309 aaPredicted RBP12.77□□□□□ -0.37
SNORD3D-201ENST00000619178 ZBED4O75132 1171 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 FLOT1O75955 427 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 GOLGA8HP0CJ92 632 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 CDC27P30260 824 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 COG2Q14746 738 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 SYDE2Q5VT97 1194 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 PAXIP1Q6ZW49 1069 aaPredicted RBP12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 CCDC84Q86UT8 332 aaPredicted RBP12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 RAB11FIP4Q86YS3 637 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 TEX2Q8IWB9 1127 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 MB21D1Q8N884 522 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 NSUN7Q8NE18 718 aaKnown RBP12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 CCDC148Q8NFR7 591 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 SMARCC2Q8TAQ2 1214 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 GLT8D2Q9H1C3 349 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 RPAP3Q9H6T3 665 aaPredicted RBP12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 RIOX1Q9H6W3 641 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 EMILIN3Q9NT22 766 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 CNTNAP5Q8WYK1 1306 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 PLXNA1Q9UIW2 1896 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 SMCHD1A6NHR9 2005 aa12.76□□□□□ -0.37
SNORD3D-201ENST00000619178 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 PNMA6FA0A0J9YX94 578 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 H3BQV1 296 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 PLXNB2O15031 1838 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 SLC10A3P09131 477 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 GJB2P29033 226 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 HOXA7P31268 230 aaPredicted RBP12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 NTRK3Q16288 839 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 CCL15Q16663 113 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 DEFB115Q30KQ5 88 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 IFFO2Q5TF58 517 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 STAG2Q8N3U4 1231 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 BRMS1Q9HCU9 246 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 SH3GLB2Q9NR46 395 aa12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 FAM217BQ9NTX9 383 aaPredicted RBP12.75□□□□□ -0.37
SNORD3D-201ENST00000619178 ZBTB5O15062 677 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 PLEKHA8P1O95397 391 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 SCG2P13521 617 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 CALML3P27482 149 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 NUCB2P80303 420 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 NOGQ13253 232 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 SAFBQ15424 915 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 PFKFB3Q16875 520 aaPredicted RBP12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 LARP1BQ659C4 914 aaKnown RBP12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 GALNT17Q6IS24 598 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 CATSPERGQ6ZRH7 1159 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 RASAL3Q86YV0 1011 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 ADGRF4Q8IZF3 695 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 CCDC82Q8N4S0 544 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 SRBD1Q8N5C6 995 aaKnown RBP12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 KIFC2Q96AC6 838 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 AMNQ9BXJ7 453 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 VAT1LQ9HCJ6 419 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 PPP1R9AQ9ULJ8 1098 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 PRR12Q9ULL5 1215 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 CIZ1Q9ULV3 898 aaPredicted RBP12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 V9GY48 417 aaPredicted RBP12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 MYH7BA7E2Y1 1941 aa12.74□□□□□ -0.37
SNORD3D-201ENST00000619178 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 ALDH1A1P00352 501 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 COPB2P35606 906 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 OAZ1P54368 228 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 MCTP2Q6DN12 878 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 PPP1R18Q6NYC8 613 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 NBPF11Q86T75 865 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 HOMER1Q86YM7 354 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 BICD2Q8TD16 824 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 PHKBQ93100 1093 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 DDX11Q96FC9 970 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 C8orf76Q96K31 380 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 NUP88Q99567 741 aaPredicted RBP12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 ALG1Q9BT22 464 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 UBA5Q9GZZ9 404 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 MAF1Q9H063 256 aa12.73□□□□□ -0.37
SNORD3D-201ENST00000619178 WDR33Q9C0J8 1336 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms