RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 WDR44Q5JSH3 913 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 SPOUT1Q5T280 376 aaKnown RBP11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 CCDC50Q8IVM0 306 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 DEPTORQ8TB45 409 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 DYDC1Q8WWB3 177 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 CEP83Q9Y592 693 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 PNPLA6Q8IY17 1366 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 ABCA6Q8N139 1617 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 POTEB2H3BUK9 544 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 DKC1O60832 514 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 DDAH1O94760 285 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 LMAN1P49257 510 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 STAT2P52630 851 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 FOXO4P98177 505 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 KRT26Q7Z3Y9 468 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 FAM207AQ9NSI2 230 aaPredicted RBP11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.31□□□□□ -0.6
SMARCA1-205ENST00000617310 NEURL4Q96JN8 1562 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 ARHGAP44Q17R89 818 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 KIAA0753Q2KHM9 967 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 GJA10Q969M2 543 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 APOL6Q9BWW8 343 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 CLSTN2Q9H4D0 955 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 TMEM63CQ9P1W3 806 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 SWAP70Q9UH65 585 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 MEIS1O00470 390 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 TBC1D10CQ8IV04 446 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 NSUN7Q8NE18 718 aaKnown RBP11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 TBCKQ8TEA7 893 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 SLC39A2Q9NP94 309 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 SLC5A4Q9NY91 659 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 M0QZ92 97 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 ASNSP08243 561 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 GBP2P32456 591 aaPredicted RBP11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 IREB2P48200 963 aaKnown RBP11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 CCDC84Q86UT8 332 aaPredicted RBP11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 OTUD5Q96G74 571 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 ANO3Q9BYT9 981 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 KIAA1024Q9UPX6 916 aa11.3□□□□□ -0.6
SMARCA1-205ENST00000617310 LRCH2Q5VUJ6 765 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 PDCL2Q8N4E4 241 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 SRRTQ9BXP5 876 aaKnown RBP11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 DCP1AQ9NPI6 582 aaPredicted RBP11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 PCDHA7Q9UN72 937 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 CCDC175P0C221 793 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 MTX1Q13505 466 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 ASPRV1Q53RT3 343 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 TBC1D16Q8TBP0 767 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 CBX8Q9HC52 389 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 ATP6V0A2Q9Y487 856 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 TRPM1Q7Z4N2 1603 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 PSMB7Q99436 277 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 POLD4Q9HCU8 107 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 LMBRD1Q9NUN5 540 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 LRRC7Q96NW7 1537 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 TACC1O75410 805 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 FANCCQ00597 558 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 SESTD1Q86VW0 696 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 MCF2L2Q86YR7 1114 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 FAM178BQ8IXR5 827 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 NELFBQ8WX92 580 aa11.29□□□□□ -0.6
SMARCA1-205ENST00000617310 SH2B2O14492 632 aaPredicted RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 POLR3GO15318 223 aaPredicted RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 DLATP10515 647 aaKnown RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 CCNA1P78396 465 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 FAM83BQ5T0W9 1011 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 CDC37Q16543 378 aaPredicted RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 ZNF569Q5MCW4 686 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 SYMPKQ92797 1274 aaKnown RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 ANKFY1Q9P2R3 1169 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 RIPOR2Q9Y4F9 1068 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 CDHR2Q9BYE9 1310 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 USP17L5A8MUK1 530 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 STX10O60499 249 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 DPEP1P16444 411 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 SYDE2Q5VT97 1194 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 GRAMD1CQ8IYS0 662 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 CEP95Q96GE4 821 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 NAA15Q9BXJ9 866 aaKnown RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 RNF26Q9BY78 433 aaPredicted RBP11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
SMARCA1-205ENST00000617310 K7ENM7 598 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 KRT86O43790 486 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 NDUFA8P51970 172 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 POLGP54098 1239 aaPredicted RBP11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 SETQ01105 290 aaPredicted RBP11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 NECTIN1Q15223 517 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 PTPROQ16827 1216 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 ADALQ6DHV7 355 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 ATG9AQ7Z3C6 839 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 C17orf53Q8N3J3 647 aaPredicted RBP11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 TEKT3Q9BXF9 490 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 NT5C3AQ9H0P0 336 aa11.27□□□□□ -0.6
SMARCA1-205ENST00000617310 MARK3P27448 753 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 SLC15A2Q16348 729 aa11.27□□□□□ -0.61
SMARCA1-205ENST00000617310 PTPN21Q16825 1174 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms