RNA–Protein interactions for RNA: ENST00000613151.1

TPR-209, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 5 BASIC

Gene TPR, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-209ENST00000613151 RRP36Q96EU6 259 aaKnown RBP20.04■□□□□ 0.8
TPR-209ENST00000613151 ZMYND12Q9H0C1 365 aa20.04■□□□□ 0.8
TPR-209ENST00000613151 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.03■□□□□ 0.8
TPR-209ENST00000613151 IQCB1Q15051 598 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 LONRF3Q496Y0 759 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 ZSCAN29Q8IWY8 852 aaPredicted RBP20.03■□□□□ 0.8
TPR-209ENST00000613151 COL2A1P02458 1487 aaPredicted RBP20.03■□□□□ 0.8
TPR-209ENST00000613151 SPDYE2BA6NHP3 402 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 SPDYE6P0CI01 402 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 ATP2C1P98194 919 aaPredicted RBP20.03■□□□□ 0.8
TPR-209ENST00000613151 ZNF174Q15697 407 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 ZNF710Q8N1W2 664 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 FERMT2Q96AC1 680 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 MTFR1LQ9H019 292 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 CSRNP2Q9H175 543 aa20.03■□□□□ 0.8
TPR-209ENST00000613151 FAM196BA6NMK8 535 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 MPHOSPH10O00566 681 aaKnown RBP20.02■□□□□ 0.8
TPR-209ENST00000613151 CERKLQ49MI3 558 aaPredicted RBP20.02■□□□□ 0.8
TPR-209ENST00000613151 KRBA2Q6ZNG9 492 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 UBA5Q9GZZ9 404 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 A0A087WWV3 80 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 GTF2F1P35269 517 aaKnown RBP eCLIP20.02■□□□□ 0.8
TPR-209ENST00000613151 PTGDRQ13258 359 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 NOLC1Q14978 699 aaKnown RBP eCLIP20.02■□□□□ 0.8
TPR-209ENST00000613151 CCDC12Q8WUD4 166 aaPredicted RBP20.02■□□□□ 0.8
TPR-209ENST00000613151 PIGSQ96S52 555 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 SEC63Q9UGP8 760 aaKnown RBP20.02■□□□□ 0.8
TPR-209ENST00000613151 TUBE1Q9UJT0 475 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 ZNRF3Q9ULT6 936 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 PCDHA6Q9UN73 950 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 PCDHA8Q9Y5H6 950 aa20.02■□□□□ 0.8
TPR-209ENST00000613151 ZNF543Q08ER8 600 aa20.01■□□□□ 0.79
TPR-209ENST00000613151 HOMER1Q86YM7 354 aa20.01■□□□□ 0.79
TPR-209ENST00000613151 MKL1Q969V6 931 aa20.01■□□□□ 0.79
TPR-209ENST00000613151 ATF5Q9Y2D1 282 aaPredicted RBP20.01■□□□□ 0.79
TPR-209ENST00000613151 FRMPD2Q68DX3 1309 aaPredicted RBP20.01■□□□□ 0.79
TPR-209ENST00000613151 CDK11BP21127 795 aaKnown RBP20.01■□□□□ 0.79
TPR-209ENST00000613151 POLD1P28340 1107 aa20.01■□□□□ 0.79
TPR-209ENST00000613151 RASGRP4Q8TDF6 673 aa20.01■□□□□ 0.79
TPR-209ENST00000613151 ZNF830Q96NB3 372 aaPredicted RBP20.01■□□□□ 0.79
TPR-209ENST00000613151 USP49Q70CQ1 688 aa20■□□□□ 0.79
TPR-209ENST00000613151 OGFOD1Q8N543 542 aa20■□□□□ 0.79
TPR-209ENST00000613151 CNNM3Q8NE01 707 aa20■□□□□ 0.79
TPR-209ENST00000613151 KANSL2Q9H9L4 492 aa20■□□□□ 0.79
TPR-209ENST00000613151 VAT1LQ9HCJ6 419 aa20■□□□□ 0.79
TPR-209ENST00000613151 MYH4Q9Y623 1939 aa20■□□□□ 0.79
TPR-209ENST00000613151 hCG_1984214I3L0E3 225 aa20■□□□□ 0.79
TPR-209ENST00000613151 NAPAP54920 295 aa20■□□□□ 0.79
TPR-209ENST00000613151 PLCB2Q00722 1185 aa20■□□□□ 0.79
TPR-209ENST00000613151 MDM2Q00987 491 aaPredicted RBP20■□□□□ 0.79
TPR-209ENST00000613151 GPATCH4Q5T3I0 446 aaKnown RBP20■□□□□ 0.79
TPR-209ENST00000613151 CEP57L1Q8IYX8 460 aa20■□□□□ 0.79
TPR-209ENST00000613151 ZNF713Q8N859 430 aaPredicted RBP20■□□□□ 0.79
TPR-209ENST00000613151 NYAP2Q9P242 653 aa20■□□□□ 0.79
TPR-209ENST00000613151 HDAC9Q9UKV0 1011 aa20■□□□□ 0.79
TPR-209ENST00000613151 ZBTB12Q9Y330 459 aaPredicted RBP20■□□□□ 0.79
TPR-209ENST00000613151 POLR2DO15514 142 aaKnown RBP19.99■□□□□ 0.79
TPR-209ENST00000613151 DALRD3Q5D0E6 543 aaKnown RBP19.99■□□□□ 0.79
TPR-209ENST00000613151 NIM1KQ8IY84 436 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 TRIM34Q9BYJ4 488 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 UTRNP46939 3433 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 CCDC194A0A1B0GVG4 234 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 VGLL3A8MV65 326 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 GNA11P29992 359 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 SHROOM1Q2M3G4 852 aaPredicted RBP19.99■□□□□ 0.79
TPR-209ENST00000613151 DPCR1Q3MIW9 517 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 AGBL3Q8NEM8 1001 aa19.99■□□□□ 0.79
TPR-209ENST00000613151 NAT10Q9H0A0 1025 aaKnown RBP19.99■□□□□ 0.79
TPR-209ENST00000613151 ESYT2A0FGR8 921 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 SMCO2A6NFE2 343 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 MCM7P33993 719 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 DLGAP5Q15398 846 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 ZRSR1Q15695 479 aaKnown RBP19.98■□□□□ 0.79
TPR-209ENST00000613151 DHX40Q8IX18 779 aaKnown RBP19.98■□□□□ 0.79
TPR-209ENST00000613151 C4orf32Q8N8J7 132 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 BRCA1P38398 1863 aaKnown RBP19.98■□□□□ 0.79
TPR-209ENST00000613151 EEF2P13639 858 aaKnown RBP19.98■□□□□ 0.79
TPR-209ENST00000613151 NLRP12P59046 1061 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 PNOCQ13519 176 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 TMEM179Q6ZVK1 233 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 SIAH1Q8IUQ4 282 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 CSRNP1Q96S65 589 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 C6orf50Q9HD87 102 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 GPCPD1Q9NPB8 672 aa19.98■□□□□ 0.79
TPR-209ENST00000613151 ATP2B2Q01814 1243 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 ARL6IP4Q66PJ3 421 aaKnown RBP19.97■□□□□ 0.79
TPR-209ENST00000613151 MTMR14Q8NCE2 650 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 EPSTI1Q96J88 318 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 BPIFA3Q9BQP9 254 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 JMJD4Q9H9V9 463 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 TMOD2Q9NZR1 351 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 CXCL9Q07325 125 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 ADGRF4Q8IZF3 695 aa19.97■□□□□ 0.79
TPR-209ENST00000613151 ZNF70Q9UC06 446 aaPredicted RBP19.97■□□□□ 0.79
TPR-209ENST00000613151 VWA3AA6NCI4 1184 aa19.96■□□□□ 0.79
TPR-209ENST00000613151 BIN1O00499 593 aa19.96■□□□□ 0.79
TPR-209ENST00000613151 ACTN4O43707 911 aaKnown RBP19.96■□□□□ 0.79
TPR-209ENST00000613151 SEPT2Q15019 361 aa19.96■□□□□ 0.79
TPR-209ENST00000613151 SYMPKQ92797 1274 aaKnown RBP19.96■□□□□ 0.79
TPR-209ENST00000613151 TAOK3Q9H2K8 898 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms