RNA–Protein interactions for RNA: ENST00000612233.1

NOP56-219, Transcript of NOP56 ribonucleoprotein, humanhuman

Gene NOP56, Length 2,980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-219ENST00000612233 LMOD1P29536 600 aaPredicted RBP15.61■□□□□ 0.09
NOP56-219ENST00000612233 TXLNAP40222 546 aa15.61■□□□□ 0.09
NOP56-219ENST00000612233 CCDC93Q567U6 631 aa15.61■□□□□ 0.09
NOP56-219ENST00000612233 KRT25Q7Z3Z0 450 aa15.61■□□□□ 0.09
NOP56-219ENST00000612233 FILIP1Q7Z7B0 1213 aa15.61■□□□□ 0.09
NOP56-219ENST00000612233 SH3RF3Q8TEJ3 882 aaPredicted RBP15.61■□□□□ 0.09
NOP56-219ENST00000612233 CCDC94Q9BW85 323 aaPredicted RBP15.61■□□□□ 0.09
NOP56-219ENST00000612233 INTS13Q9NVM9 706 aa15.61■□□□□ 0.09
NOP56-219ENST00000612233 LIMA1Q9UHB6 759 aaKnown RBP15.61■□□□□ 0.09
NOP56-219ENST00000612233 PSME4Q14997 1843 aa15.61■□□□□ 0.09
NOP56-219ENST00000612233 COL11A2P13942 1736 aaPredicted RBP15.61■□□□□ 0.09
NOP56-219ENST00000612233 IRX5P78411 483 aaPredicted RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 GPSM2P81274 684 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 EARS2Q5JPH6 523 aaKnown RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 FAM196AQ6ZSG2 479 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 RNF217Q8TC41 542 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 ERCC4Q92889 916 aaPredicted RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 FEZ1Q99689 392 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 IGKV6D-41A0A0C4DH26 115 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 STXBP3O00186 592 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 PTGDRQ13258 359 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 CNNM4Q6P4Q7 775 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 NOC3LQ8WTT2 800 aaKnown RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 COA1Q9GZY4 146 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 ANKIB1Q9P2G1 1089 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 CGNQ9P2M7 1197 aaKnown RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 NFE2L3Q9Y4A8 694 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 ARFGEF1Q9Y6D6 1849 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 A0A0G2JS52 829 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 PPP1R3GB7ZBB8 358 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 RHBDL3P58872 404 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 CCDC96Q2M329 555 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 PTF1AQ7RTS3 328 aa15.6■□□□□ 0.09
NOP56-219ENST00000612233 ZNF444Q8N0Y2 327 aaPredicted RBP15.6■□□□□ 0.09
NOP56-219ENST00000612233 SNHG28P0DPA3 235 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 ATP1A3P13637 1013 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 NBPF9Q3BBW0 867 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 ZNF658Q5TYW1 1059 aaPredicted RBP15.59■□□□□ 0.09
NOP56-219ENST00000612233 RINLQ6ZS11 566 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 ARMCX6Q7L4S7 300 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 AMIGO3Q86WK7 504 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 OTUD6BQ8N6M0 293 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 C16orf45Q96MC5 204 aaPredicted RBP15.59■□□□□ 0.09
NOP56-219ENST00000612233 SYNRGQ9UMZ2 1314 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 A0A087X0B3 334 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 USP17L8P0C7I0 530 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 CYP2D6P10635 497 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 MAP2K1Q02750 393 aaPredicted RBP15.59■□□□□ 0.09
NOP56-219ENST00000612233 TUBB2AQ13885 445 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 ARID5BQ14865 1188 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 CFAP100Q494V2 611 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 ZNF513Q8N8E2 541 aaPredicted RBP15.59■□□□□ 0.09
NOP56-219ENST00000612233 TUBB2BQ9BVA1 445 aa15.59■□□□□ 0.09
NOP56-219ENST00000612233 TSPY3P0CV98 308 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 TSPY8P0CW00 308 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 PIP4K2BP78356 416 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 GABPAQ06546 454 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 FMR1Q06787 632 aaKnown RBP eCLIP15.58■□□□□ 0.09
NOP56-219ENST00000612233 IQCDQ96DY2 449 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 MED15Q96RN5 788 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 RIOX1Q9H6W3 641 aa15.58■□□□□ 0.09
NOP56-219ENST00000612233 FLT1P17948 1338 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 SERPINB2P05120 415 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 GNA11P29992 359 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 TMEM47Q9BQJ4 181 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 MKNK2Q9HBH9 465 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 ADD3Q9UEY8 706 aaKnown RBP15.58■□□□□ 0.08
NOP56-219ENST00000612233 PCDHA6Q9UN73 950 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 PCDHA8Q9Y5H6 950 aa15.58■□□□□ 0.08
NOP56-219ENST00000612233 A0A087WWV3 80 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 LOC102724159A0A0B4J2E5 919 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 POLRMTO00411 1230 aaKnown RBP15.57■□□□□ 0.08
NOP56-219ENST00000612233 FOXN1O15353 648 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 PRDM1O75626 825 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 ETF1P62495 437 aaKnown RBP15.57■□□□□ 0.08
NOP56-219ENST00000612233 PWP2Q15269 919 aaKnown RBP15.57■□□□□ 0.08
NOP56-219ENST00000612233 ASPRV1Q53RT3 343 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 DNAJC14Q6Y2X3 702 aaPredicted RBP15.57■□□□□ 0.08
NOP56-219ENST00000612233 CMTR1Q8N1G2 835 aaKnown RBP15.57■□□□□ 0.08
NOP56-219ENST00000612233 DPF2Q92785 391 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 EHD4Q9H223 541 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 SMIM22K7EJ46 135 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 TUBB4BP68371 445 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 NCBP1Q09161 790 aaKnown RBP15.57■□□□□ 0.08
NOP56-219ENST00000612233 FAM47AQ5JRC9 791 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 KCTD17Q8N5Z5 321 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 TBC1D16Q8TBP0 767 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 SIPA1L1O43166 1804 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 BTDP43251 543 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 CDK8P49336 464 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 TC2NQ8N9U0 490 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 LRRC4BQ9NT99 713 aa15.57■□□□□ 0.08
NOP56-219ENST00000612233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.56■□□□□ 0.08
NOP56-219ENST00000612233 FAM205CA6NFA0 338 aa15.56■□□□□ 0.08
NOP56-219ENST00000612233 SLU7O95391 586 aaKnown RBP15.56■□□□□ 0.08
NOP56-219ENST00000612233 FILIP1LQ4L180 1135 aa15.56■□□□□ 0.08
NOP56-219ENST00000612233 REXO1L1PQ8IX06 675 aa15.56■□□□□ 0.08
NOP56-219ENST00000612233 EXOC8Q8IYI6 725 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms