RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 RPAP1Q9BWH6 1393 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-219ENST00000606715 KDM3AQ9Y4C1 1321 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 BSDC1Q9NW68 430 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-219ENST00000606715 MED23Q9ULK4 1368 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 MMP10P09238 476 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 TYRO3Q06418 890 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 ITKQ08881 620 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 KRT40Q6A162 431 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 ABCA6Q8N139 1617 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 ZSCAN20P17040 1043 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-219ENST00000606715 TUBB4BP68371 445 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 PROSER3Q2NL68 480 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 OSBPL3Q9H4L5 887 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 SPON1Q9HCB6 807 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 KCNK9Q9NPC2 374 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 KCNH3Q9ULD8 1083 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 LIG4P49917 911 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 CEP128Q6ZU80 1094 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 KRT26Q7Z3Y9 468 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 KIF9Q9HAQ2 790 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 MYO3BQ8WXR4 1341 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 HSPD1P10809 573 aaKnown RBP12.19□□□□□ -0.46
SHANK2-219ENST00000606715 VPS52Q8N1B4 723 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CYP27B1O15528 508 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 TRIM14Q14142 442 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 ABCB5Q2M3G0 1257 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 FAM182BQ5T319 152 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CIAPIN1Q6FI81 312 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 ZNF365Q70YC5 407 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 FAM184BQ9ULE4 1060 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CCPG1Q9ULG6 757 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CTNND2Q9UQB3 1225 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CTAGE9A4FU28 777 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 GOLGA6CA6NDK9 693 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 GOLGA6BA6NDN3 693 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 H0YCG3 227 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 GOLGA6DP0CG33 693 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 SLC12A2P55011 1212 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 MYL5Q02045 173 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 ASIC2Q16515 512 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 XKR9Q5GH70 373 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 PNMA1Q8ND90 353 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 IRAK4Q9NWZ3 460 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 GOLGA6AQ9NYA3 693 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 TBC1D7Q9P0N9 293 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 ZHX1Q9UKY1 873 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-219ENST00000606715 GUCA1BQ9UMX6 200 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 PHKA1P46020 1223 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 TNNC1P63316 161 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CASC4Q6P4E1 433 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHANK2-219ENST00000606715 NAP1L3Q99457 506 aaPredicted RBP12.19□□□□□ -0.46
SHANK2-219ENST00000606715 CARMIL3Q8ND23 1372 aa12.19□□□□□ -0.46
SHANK2-219ENST00000606715 hCG_1984214I3L0E3 225 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 RAD51AP2Q09MP3 1159 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 TFDP1Q14186 410 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 ZNF713Q8N859 430 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-219ENST00000606715 RETREG2Q8NC44 543 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 PARD3BQ8TEW8 1205 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 CAPZA3Q96KX2 299 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 ZNF277Q9NRM2 450 aaPredicted RBP12.18□□□□□ -0.46
SHANK2-219ENST00000606715 XPOTO43592 962 aaKnown RBP12.18□□□□□ -0.46
SHANK2-219ENST00000606715 C1orf228Q6PIY5 440 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 GCNAQ96QF7 691 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 TSGA10Q9BZW7 698 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 LMCD1Q9NZU5 365 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 TLDC2A0PJX2 215 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 METTL23Q86XA0 190 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 CNGA4Q8IV77 575 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 MLKLQ8NB16 471 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 FANCBQ8NB91 859 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 DNAJC25Q9H1X3 360 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 PAXBP1Q9Y5B6 917 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 SMCO2A6NFE2 343 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 BCRP11274 1271 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 ASPRV1Q53RT3 343 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 ZMYM1Q5SVZ6 1142 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 TRIM50Q86XT4 487 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 SLFN12Q8IYM2 578 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 UBL4BQ8N7F7 174 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 HESX1Q9UBX0 185 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 TACC3Q9Y6A5 838 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 H7C1W4 665 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 ATXN8OSP0DMR3 200 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 BARGINQ6ZT62 677 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 FBXO11Q86XK2 927 aa12.18□□□□□ -0.46
SHANK2-219ENST00000606715 POLGP54098 1239 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 SATB1Q01826 763 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 DYMQ7RTS9 669 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 CCDC110Q8TBZ0 833 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 ZFP91Q96JP5 570 aaPredicted RBP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 FTOQ9C0B1 505 aaKnown RBP eCLIP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 ADD3Q9UEY8 706 aaKnown RBP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 AKT3Q9Y243 479 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 DCCP43146 1447 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 TLR3O15455 904 aaKnown RBP12.17□□□□□ -0.46
SHANK2-219ENST00000606715 IGSF3O75054 1194 aa12.17□□□□□ -0.46
SHANK2-219ENST00000606715 SLFN13Q68D06 897 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms